Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05616 ATGGCATTGAATTTCTCTCATCGACCTGTTTTTACGGGTGGTTTGGCGGAGGATAATATGAGGATGGGGAATGGGTATAGAGTGGAGGGTATTAATGAGATGAGTGGTGGTGGTGGTGGTGGTGGTGGTAATGGTGGTGATGGATTTGGAAATGGTTGGCAGGATGTTGAAGATTGTTTTGATTATGGAAATGATAGATGTGATAGAGGGGGTGTGAGTGGTACTCAGGATTCTGTTTCGAATGATATTGTTGATCGTTTGCCTACGGATCCTTTTGGTATGGGGATTGGTACTACCTTCACAGCCATCACCGGATGGCTGGAGGATTTGGATTTCGATTATGGGGATTATGGTGGGTATGGTGATTATGGTGGCGATGAGATGGGTACGAGTGGTGAGAATTACCCTTTGTTTGCTGGGTTGAATTTCATCTGGAACAATGCTGTGAGGTTCCATACATTTCCGCAGGGGGGAAATGTGGGCATGGAGGAGAATAGATTTCAAGGGGTGAGTGAAGTTGGAGAAGCTTCCTGCAGCTTTAGTGGCGAATCTTCTCGTGACATGGATGGTGTAATGGGTGCTAGCGTGTCGGGTGACGTGAACATGAATGATGTGAAATGCCATGCAATAGATGAATACACTCATTCAGCTATAATGTATGCGCTCCCTCATTTGGGTTTGTCGGATCTTTTTGCAGTTGAGAGAGTATGTAAATATCTGTATTCTATTGTTCGAAATGATGCACTTTTGTGGACAAGCATCCACATTGATCAGCCTTTAAGTGAAAGGCTCACCGATGATGTTCTTTTGGAATTAACCAGTAGGGCTCAAGGTAAACTTGAGTGTCTGAGTTTGGTGGAATGTTCTAGGATAACGGACGATGGTTTAAGGCGTGTTCTTGAAGCCAATCCTGATATAATCAAGTTGAGTGTTCCCGGATGTACAAGACTAAGTATTGATGGTATTGTGGGTATGTTAAAAGCTTACAAAAACTCTCCGGGTACACGAGGTGTGAAGCATTTACACATAGGCGGCCTTTATGGTGTTACACCAACGCATTTTGAAGAAATAAAGCTCTTATTGAGCACTGACAGGAAAAAACAGAAGCAATCCCATACCGACAGTCAACTACAGGAGCAATCCCATACTGACAGTCAACAACAGGAGCATTCCCATACTGACAATCAACAACAGGAGCATTCCGGCGCTGACAGTCAACTGAAGAAGCATTCCAACAAACCGCATTTCTATTGCCGTTGGAATTTGTATATACCCCGCGATGATGATAGGTCCTTAGACATTGAAGTTTGTCCTCGATGTGAGAATTTAAGGCTTGTATATGATTGTCCAGCAGAAGGCTGTCATGGGGTGGTGGGGCATGCCTCTAAGGTGTGTCGGGCTTGCACGCTTTGCATACCGCGATGTAGTCAGTGTGGCCGGTGCATCAGTGATGGCGAGTATGAAGAAACATTTTGTCTGGAATTGCTTTGCTCTCAATGTTCTCATCATTTGTCCAAATTGATAGGAAAGACAAATGGAAAGGTTGGGCTAATCAGGCAAAGTTCTCCCTAA 1572 0.4434 MALNFSHRPVFTGGLAEDNMRMGNGYRVEGINEMSGGGGGGGGNGGDGFGNGWQDVEDCFDYGNDRCDRGGVSGTQDSVSNDIVDRLPTDPFGMGIGTTFTAITGWLEDLDFDYGDYGGYGDYGGDEMGTSGENYPLFAGLNFIWNNAVRFHTFPQGGNVGMEENRFQGVSEVGEASCSFSGESSRDMDGVMGASVSGDVNMNDVKCHAIDEYTHSAIMYALPHLGLSDLFAVERVCKYLYSIVRNDALLWTSIHIDQPLSERLTDDVLLELTSRAQGKLECLSLVECSRITDDGLRRVLEANPDIIKLSVPGCTRLSIDGIVGMLKAYKNSPGTRGVKHLHIGGLYGVTPTHFEEIKLLLSTDRKKQKQSHTDSQLQEQSHTDSQQQEHSHTDNQQQEHSGADSQLKKHSNKPHFYCRWNLYIPRDDDRSLDIEVCPRCENLRLVYDCPAEGCHGVVGHASKVCRACTLCIPRCSQCGRCISDGEYEETFCLELLCSQCSHHLSKLIGKTNGKVGLIRQSSP 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05616 523 MobiDBLite consensus disorder prediction 385 410 - -
Vivi5g05616 523 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 195 480 - -
Vivi5g05616 523 Gene3D Ribonuclease Inhibitor 260 408 IPR032675 -
Vivi5g05616 523 MobiDBLite consensus disorder prediction 368 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05616 Vivi-Chr5 159302029 159307474 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05616 - - mtr:25501704 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05616 5 159302029 159307474 Vivi5g05616 5 159302029 159307474 ECH