Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05584 ATGATCGGAGCCGAAAGAACAACCGCTCGTAACAGACTCCGATCCTCCTCCCCTGAACCCGACGCCGATTCTCTCCATGAAAGTTCTAACCCTCACACAGGTAGAAGCAAACACGGAAACTCTATTCCGTTGTTCGAAAGTTTCAAAATCAAAGCGCTTATTGCAATCACCTTCTTCTTCATCACGTTGTTTCTCATTCGTCACTTTTTTAATTCCGTTGCAGAACCTCGCGTCGTTACGCCATTTCCCGCGCCAAAGATCATGGACCTTCCTCAGTTTCAAGGTGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGTCCTCATCTCTATCTTGGAATCCGTGCAAGGACTCCACAATCTTTGATGGCTGGATTAATGTGGATTGGTGTGAAAGATGGTAGTAATCACTTGAGGCACGTCTGCAAACATGAGGATGAATTAAGTGCTTATGGTTGGATAAAGCATAATGGACGTGATTATGGGCATCAAGTATTAGTTGACCATGGCCTGATCTTGACTACTGAGTTCTTAAAATCAAATGGGGATGGCAGCGGTTTTGGAGGCGACTGGGCAGTTCGAATTGATGTGCAGATTGATAAGTCTAAGTGGAATGAGGAATTTGGGAAAGGCGGACAGCTCTTTTTCTATCTGGCTGATGAAGGTGGTAATGTTCTTGATGTAGGTAGAGAAAAATTGAACATTCGCGAGAGTTCTTTACTTGCATCTGGCTCTCGAACTGACATTGGAGACTGGCAGCTACATTTAAAGTCAACGGACGATCTGAAACTGCATTACTCTGGATTTCACACATCTCACTTTCACAATTTGTCCGATCTTGTTGAGGAAAACCTTGCATCACAAACAAGAAACCATGCTCAAATGCAGCTATCTGACTCAATAGATGATTCTCCAAATGTGTTAGTTTTTCAGATTATTGGTGGCTTTCCTTTCACTACAGATATTGCACTTATCTCAGGAACTGATTCAGAAAGTTCTAGTGTAGAAGAGCGTGTCAATAGTCTTACAGGAGCCTCACTGTCCAATGAACTGAAATATAAAGAACAAACATTTGATGAAAAGATTGAGAAAACTTTCAATTTGGCTGAGAAGGTGGATTCAGAATCCATTTCTGTTGGTAAGTATGCTGTTGGAAGCTTATTAGGTGGCATCGGCTACTTCTATGGCCAGTCAAAAATTGCTCAGTCAAGAACCCTTGATCATAGAGAACATGATGCTTATCTATCATATTGGTCTGCTGAGCTTTACACGGCTGTACCATGTCGACCAATCTTCCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTGTAATCTGGCGCTGGGATATTCATATTTCATTGGATATCATTGGACACTGGTTAGATTTGATGAACATTGATGGATGGATACCACGAGAACAAATTCTGGGGGCTGAAGCACTAAGTAAGATTCCAGAGGAATATGTTCCTCAGCATCCAACAAATGCAAACCCTCCAACTTTGTTTTTAGCATTAAGGGGTATAGTCAATGGCTTGAATAATGATGAGTTTAATGCGACGGAAAGAAGTGAGATCTCTCTGTTCCTGGAGTGTGCCTTTAGTCGATTAGAAGCATGGTTCCAATGGCTCAATACAACTCAGTCAGGGGAGCAAATGAGTAGCTACTATTGGCGTGGACGGGACAATGGGACAACACTTGATTTAAATTTAAATCCCCAGACGCTTTCCTCTGGATTGGATGATTATCCGAGAGCTTCTCACCCAAGTTCAGATGAACGCCATCTGGATCTTAGATGTTGGGTGTTACTTGCAGCACAATGCATGCATTCCATTGAAGAGTTGTTAAATAAGGAAACCAAACCTGGAAAGGATTATGGTTCTACTGTGAAATTGCTATCAGATCAAGAGTTATTGAACAAGATGCATTTTGACGACGAGTATGGTGCTTACTTTGATTTTGGAAATCATACGGAAGAGGTTCGACTTGAATGGAAAGAATTGAAAGCAGAAAACGCCCATGTGACTCGTCAGCTTGTTCGAGAAGTTTTAGAGAGCCCTGTGTTGAGATTGGTTCCTCATATTGGTTATGTTAATTTCTTCCCATTCATGGGGAGAATCATTCCATCTGGATCATGGATCCTGGAGAAGCAGCTCGAACTCATTTCAAATCGCAGCCTATTATGGAGTGAATATGGACTTCGTTCTCTTGCCGAAACAAGTTCCTTGTACATGAAATACAACAATGAACATGATGCTCCATACTGGAGAGGTTCAATTTGGATAAACATGAATTACAGGATCCTTTCAGCACTCCACCATTATTCTAAAGAGAATGGGCCATATCAGGATAAAGTTAAAGCCATGTACAACGAATTGAGAACCAATTTAATTAGAAACATAGTGCGAAACTATCAACAGACTGGATTTTTGTGGGAGCAGTATGATCAGATTAAAGGAAGCGGAAAAGGTGCACATCCATTTACAGGTTGGACATCACTTGCTGTGTTAATCATGGCGGAAGCGTACGACAAAATTTAG 2544 0.4151 MIGAERTTARNRLRSSSPEPDADSLHESSNPHTGRSKHGNSIPLFESFKIKALIAITFFFITLFLIRHFFNSVAEPRVVTPFPAPKIMDLPQFQGEHKESLYWGTYRPHLYLGIRARTPQSLMAGLMWIGVKDGSNHLRHVCKHEDELSAYGWIKHNGRDYGHQVLVDHGLILTTEFLKSNGDGSGFGGDWAVRIDVQIDKSKWNEEFGKGGQLFFYLADEGGNVLDVGREKLNIRESSLLASGSRTDIGDWQLHLKSTDDLKLHYSGFHTSHFHNLSDLVEENLASQTRNHAQMQLSDSIDDSPNVLVFQIIGGFPFTTDIALISGTDSESSSVEERVNSLTGASLSNELKYKEQTFDEKIEKTFNLAEKVDSESISVGKYAVGSLLGGIGYFYGQSKIAQSRTLDHREHDAYLSYWSAELYTAVPCRPIFPRGFLWDEGFHQLVIWRWDIHISLDIIGHWLDLMNIDGWIPREQILGAEALSKIPEEYVPQHPTNANPPTLFLALRGIVNGLNNDEFNATERSEISLFLECAFSRLEAWFQWLNTTQSGEQMSSYYWRGRDNGTTLDLNLNPQTLSSGLDDYPRASHPSSDERHLDLRCWVLLAAQCMHSIEELLNKETKPGKDYGSTVKLLSDQELLNKMHFDDEYGAYFDFGNHTEEVRLEWKELKAENAHVTRQLVREVLESPVLRLVPHIGYVNFFPFMGRIIPSGSWILEKQLELISNRSLLWSEYGLRSLAETSSLYMKYNNEHDAPYWRGSIWINMNYRILSALHHYSKENGPYQDKVKAMYNELRTNLIRNIVRNYQQTGFLWEQYDQIKGSGKGAHPFTGWTSLAVLIMAEAYDKI 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05584 847 MobiDBLite consensus disorder prediction 1 37 - -
Vivi5g05584 847 FunFam mannosyl-oligosaccharide glucosidase 370 844 - -
Vivi5g05584 847 MobiDBLite consensus disorder prediction 16 33 - -
Vivi5g05584 847 Gene3D - 370 846 IPR012341 GO:0005975
Vivi5g05584 847 SUPERFAMILY Six-hairpin glycosidases 352 844 IPR008928 GO:0005975
Vivi5g05584 847 Pfam Glycosyl hydrolase family 63 N-terminal domain 100 300 IPR031631 -
Vivi5g05584 847 Gene3D - 88 369 IPR038518 -
Vivi5g05584 847 FunFam Mannosyl-oligosaccharide glucosidase GCS1 88 369 - -
Vivi5g05584 847 Pfam Glycosyl hydrolase family 63 C-terminal domain 343 842 IPR031335 -
Vivi5g05584 847 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 56 844 IPR004888 GO:0004573|GO:0009311
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05584 Vivi-Chr5 159039972 159049229 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05584 76 844 Glycoside Hydrolase AT1G24320 57.532 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05584 K01228 - gmx:100795691 1343.95
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05584 5 159039972 159049229 Vivi5g05584 5 159039972 159049229 ECH