Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05583 ATGATCGGAGCCGAAAGAACAACCGCTCGTAACAGACTCCGATCCTCCTCCCCTGAACCCGACGCCGATTCTCTCCATGAAAGTTCTAACCCTCACACAGAACCTCGCGTCGTTACGCCATTTCCCGCGCCAAAGATCATGGACCTTCCTCAGTTTCAAGGTGAGCACAAGGAGAGTTTGTATTGGGGAACTTATCGTCCTCATCTCTATCTTGGAATCCGTGCAAGGACTCCACAATCTTTGATGGCTGGATTAATGTGGATTGGTGTGAAAGATGGTAGTAATCACTTGAGGCACGTCTGCAAACATGAGGATGAATTAAGTGCTTATGGTTGGATAAAGCATAATGGACGTGATTATGGGCATCAAGTATTAGTTGACCATGGCCTGATCTTGACTACTGAGTTCTTAAAATCAAATGGGGATGGCAGCGGTTTTGGAGGCGACTGGGCAGTTCGAATTGATGTGCAGATTGATAAGTCTAAGTGGAATGAGGAATTTGGGAAAGGCGGACAGCTCTTTTTCTATCTGGCTGATGAAGGTGGTAATGTTCTTGATGTAGGTAGAGAAAAATTGAACATTCGCGAGAGTTCTTTACTTGCATCTGGCTCTCGAACTGACATTGGAGACTGGCAGCTACATTTAAAGTCAACGGACGATCTGAAACTGCATTACTCTGGATTTCACACATCTCACTTTCACAATTTGTCCGATCTTGTTGAGGAAAACCTTGCATCACAAACAAGAAACCATGCTCAAATGCAGCTATCTGACTCAATAGATGATTCTCCAAATGTGTTAGTTTTTCAGATTATTGGTGGCTTTCCTTTCACTACAGATATTGCACTTATCTCAGGAACTGATTCAGAAAGTTCTAGTGTAGAAGAGCGTGTCAATAGTCTTACAGGAGCCTCACTGTCCAATGAACTGAAATATAAAGAACAAACATTTGATGAAAAGATTGAGAAAACTTTCAATTTGGCTGAGAAGGTGGATTCAGAATCCATTTCTGTTGGTAAGTATGCTGTTGGAAGCTTATTAGGTGGCATCGGCTACTTCTATGGCCAGTCAAAAATTGCTCAGTCAAGAACCCTTGATCATAGAGAACATGATGCTTATCTATCATATTGGTCTGCTGAGCTTTACACGGCTGTACCATGTCGACCAATCTTCCCAAGAGGATTTTTATGGGATGAAGGTTTTCATCAACTTGTAATCTGGCGCTGGGATATTCATATTTCATTGGATATCATTGGACACTGGTTAGATTTGATGAACATTGATGGATGGATACCACGAGAACAAATTCTGGGGGCTGAAGCACTAAGTAAGATTCCAGAGGAATATGTTCCTCAGCATCCAACAAATGCAAACCCTCCAACTTTGTTTTTAGCATTAAGGGGTATAGTCAATGGCTTGAATAATGATGAGTTTAATGCGACGGAAAGAAGTGAGATCTCTCTGTTCCTGGAGTGTGCCTTTAGTCGATTAGAAGCATGGTTCCAATGGCTCAATACAACTCAGTCAGGGGAGCAAATGAGTAGCTACTATTGGCGTGGACGGGACAATGGGACAACACTTGATTTAAATTTAAATCCCCAGACGCTTTCCTCTGGATTGGATGATTATCCGAGAGCTTCTCACCCAAGTTCAGATGAACGCCATCTGGATCTTAGATGTTGGGTGTTACTTGCAGCACAATGCATGCATTCCATTGAAGAGTTGTTAAATAAGGAAACCAAACCTGGAAAGGATTATGGTTCTACTGTGAAATTGCTATCAGATCAAGAGTTATTGAACAAGATGCATTTTGACGACGAGTATGGTGCTTACTTTGATTTTGGAAATCATACGGAAGAGGTTCGACTTGAATGGAAAGAATTGAAAGCAGAAAACGCCCATGTGACTCGTCAGCTTGTTCGAGAAGTTTTAGAGAGCCCTGTGTTGAGATTGGTTCCTCATATTGGTTATGTTAATTTCTTCCCATTCATGGGGAGAATCATTCCATCTGGATCATGGATCCTGGAGAAGCAGCTCGAACTCATTTCAAATCGCAGCCTATTATGGAGTGAATATGGACTTCGTTCTCTTGCCGAAACAAGTTCCTTGTACATGAAATACAACAATGAACATGATGCTCCATACTGGAGAGGTTCAATTTGGATAAACATGAATTACAGGATCCTTTCAGCACTCCACCATTATTCTAAAGAGAATGGGCCATATCAGGATAAAGTTAAAGCCATGTACAACGAATTGAGAACCAATTTAATTAGAAACATAGTGCGAAACTATCAACAGACTGGATTTTTGTGGGAGCAGTATGATCAGATTAAAGGAAGCGGAAAAGGTGCACATCCATTTACAGGTTGGACATCACTTGCTGTGTTAATCATGGCGGAAGCGTACGACAAAATTTAG 2421 0.4168 MIGAERTTARNRLRSSSPEPDADSLHESSNPHTEPRVVTPFPAPKIMDLPQFQGEHKESLYWGTYRPHLYLGIRARTPQSLMAGLMWIGVKDGSNHLRHVCKHEDELSAYGWIKHNGRDYGHQVLVDHGLILTTEFLKSNGDGSGFGGDWAVRIDVQIDKSKWNEEFGKGGQLFFYLADEGGNVLDVGREKLNIRESSLLASGSRTDIGDWQLHLKSTDDLKLHYSGFHTSHFHNLSDLVEENLASQTRNHAQMQLSDSIDDSPNVLVFQIIGGFPFTTDIALISGTDSESSSVEERVNSLTGASLSNELKYKEQTFDEKIEKTFNLAEKVDSESISVGKYAVGSLLGGIGYFYGQSKIAQSRTLDHREHDAYLSYWSAELYTAVPCRPIFPRGFLWDEGFHQLVIWRWDIHISLDIIGHWLDLMNIDGWIPREQILGAEALSKIPEEYVPQHPTNANPPTLFLALRGIVNGLNNDEFNATERSEISLFLECAFSRLEAWFQWLNTTQSGEQMSSYYWRGRDNGTTLDLNLNPQTLSSGLDDYPRASHPSSDERHLDLRCWVLLAAQCMHSIEELLNKETKPGKDYGSTVKLLSDQELLNKMHFDDEYGAYFDFGNHTEEVRLEWKELKAENAHVTRQLVREVLESPVLRLVPHIGYVNFFPFMGRIIPSGSWILEKQLELISNRSLLWSEYGLRSLAETSSLYMKYNNEHDAPYWRGSIWINMNYRILSALHHYSKENGPYQDKVKAMYNELRTNLIRNIVRNYQQTGFLWEQYDQIKGSGKGAHPFTGWTSLAVLIMAEAYDKI 806
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05583 806 FunFam mannosyl-oligosaccharide glucosidase 329 803 - -
Vivi5g05583 806 Pfam Glycosyl hydrolase family 63 N-terminal domain 59 259 IPR031631 -
Vivi5g05583 806 Pfam Glycosyl hydrolase family 63 C-terminal domain 302 801 IPR031335 -
Vivi5g05583 806 Gene3D - 47 328 IPR038518 -
Vivi5g05583 806 FunFam Mannosyl-oligosaccharide glucosidase GCS1 47 328 - -
Vivi5g05583 806 MobiDBLite consensus disorder prediction 16 30 - -
Vivi5g05583 806 MobiDBLite consensus disorder prediction 1 44 - -
Vivi5g05583 806 SUPERFAMILY Six-hairpin glycosidases 311 803 IPR008928 GO:0005975
Vivi5g05583 806 PANTHER MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE 35 803 IPR004888 GO:0004573|GO:0009311
Vivi5g05583 806 Gene3D - 329 805 IPR012341 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05583 Vivi-Chr5 159039972 159049229 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05583 17 803 Glycoside Hydrolase AT1G24320 56.726 0.0 932
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05583 K01228 - gmx:100795691 1315.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05583 5 159039972 159049229 Vivi5g05583 5 159039972 159049229 ECH