Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05561 ATGACTACATCAAGGCGTCTCTCGGTTAGGAAGGTGGAGAAGTTTGAGAAAAACATTACAAAAAGAGGATTTGTGCCAGAAACAACTGTTAAGAAAGGAAAAGACTATCCTGTTGGCCCAATCGTGCTTGGGTTCTTCGTCTTTGTTGTCATTGGATCATCTCTGTTTCAGATAATCAGGACAGCAACCAGTGGAGGCATGGCATAA 207 0.4251 MTTSRRLSVRKVEKFEKNITKRGFVPETTVKKGKDYPVGPIVLGFFVFVVIGSSLFQIIRTATSGGMA 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05561 68 PANTHER STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN SERP1/RAMP4 1 68 IPR010580 GO:0005783
Vivi5g05561 68 Pfam Ribosome associated membrane protein RAMP4 8 61 IPR010580 GO:0005783
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05561 Vivi-Chr5 158720754 158722574 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05561 - - gmx:100801005 108.612
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05561 5 158720754 158722574 Vivi5g05561 5 158720754 158722574 ECH