Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05555 TCGTCGGTGTCGTCGTTGAGGCGTTCGATGGCGGCGAGTCAGATAACGCCGGCGGGATTCGTTTCGTTGCTTTTGGGAATTTCGATGGCTCTGATGTTGTGTGGTTCGGTTACGTTTGTGATTGGGTTTATGTTGTTGCCGTGGATTCTTGGGTTGGTTATGGTGTTTTATGTTGCTGGTGTTGTTTCGGCTATTTCTGTTTTGGGTCGGTCCATTCTTTGCTTCGCTTCGCCGCGTAAGGGTTATCCTGAGTGGAAATTGTTATGA 267 0.4869 SSVSSLRRSMAASQITPAGFVSLLLGISMALMLCGSVTFVIGFMLLPWILGLVMVFYVAGVVSAISVLGRSILCFASPRKGYPEWKLL 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05555 88 PANTHER TRANSMEMBRANE PROTEIN 4 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05555 Vivi-Chr5 158636285 158638103 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05555 - - vvo:131605846 172.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05555 5 158636285 158638103 Vivi5g05555 5 158636285 158638103 ECH
Vivi3g03407 3 57246852 57247915 Vivi5g05555 5 158636285 158638103 PCT