Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05373 ATGACAAGTTTCAACCGTGATTCTCTTTCATCACAATCTGTTCCCAGTTCAACAAAGCTTCAAGCCATTATATCAGGAAAAGAAGTAACAGACTCAAAAGACAAAAACCTAGTACCAACACAAACTTTGTTACCTATGAAAAAGAACAGTGGTAACGAGGTTGTTAAGAAGAAAAGGGAAACAAAGAGTTTATCAGAACTTGAATTGGAGGAATTAAAAGGGTTCATGGATTTGGGTTTTGTTTTCTCAGAGGAAGATAAAAATTCAAACTTGGTTTCAATTATTCCTGGGTTAAGAAGACTTGGGGAGAAAGATGAAGAACAAAAAGAAGAAGATGTTTGTGATGAGTCTGTGATTCAAAGACCTTATCTCTCTGAAGCTTGGGAAGTTGATGAGAGAGAAAAAGTGAACTCTTTGATGAATTGGAAAGTCCCTGCTATGAAGAATGAAGTTGATATAAAAAAGAGTCTCAGATTGTGGGCACACAATGTTGCTTCTATTGTTAGATTAGAATTGAGATGA 522 0.3544 MTSFNRDSLSSQSVPSSTKLQAIISGKEVTDSKDKNLVPTQTLLPMKKNSGNEVVKKKRETKSLSELELEELKGFMDLGFVFSEEDKNSNLVSIIPGLRRLGEKDEEQKEEDVCDESVIQRPYLSEAWEVDEREKVNSLMNWKVPAMKNEVDIKKSLRLWAHNVASIVRLELR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05373 173 Pfam Protein of unknown function (DUF1685) 68 98 IPR012881 -
Vivi5g05373 173 PANTHER OS06G0550800 PROTEIN 22 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05373 Vivi-Chr5 156139080 156139882 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05373 - - psat:127105614 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05373 5 156139080 156139882 Vivi5g05373 5 156139080 156139882 ECH
Vivi5g05373 5 156139080 156139882 Vivi5g03431 5 126080382 126081326 ECH
Vivi5g05374 5 156150203 156151244 Vivi5g05373 5 156139080 156139882 PCT