Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05331 TTTGTTTTGGTATATACTTTTCTTCTTGAGAAAGAAAATCATCAATTCCATACCCCTATTTGCATTTTACACCGTCAGCTCACAACCTCCTCAATTCGTGCCTCCAAAAATGAACAACCATTAGAAACTTCACAGTCTTCAATGGACACAAACTCCCAATACGACGACGTTTTCTTCGACGCCTCTCACCAATGCCCTTTCCACCATTGCTCCGGCACCACCCACCATACCATGCCAGAATCTCCCCCTTCCTCTTCCGGTCAATGCGACCCTGACCCACTCTCTTCACCTTCCTCCACCAAACTCCGTCGCCGTTCATTTCACCGTCCATTACCGGATAAAGAATCTCCCGACACCGTTTCCGGCACCAATTTGAATAACCCGGAAATAACCAAGAGTCAAAATCATGCAGTTTTGAAGGAAATTGAGAATTTTTCCGAGGAAGGGAAATTTCATTTGTCTCCATCTCCGAGTGGTGTTATCGGAGAAGATATAAACGATGAATCGACGTTAACTACAGTTACACACGACGAGACACTCGGTGATTCAGCTGAGTCACCGGGTGAACTCAACGATTTATCTTCGAATTTACTTGATTATGCAACGGGATTGGTGATTAGGTTAATCATGTTTCAAATTAGGGTTTTCTTTATGTTAATGAAGTCTCCGGTTTCATTCATGTTTCATGCTTGGATGTTTTGTATAGACCCTTTTGGAACAATGAGAAAAGGGAAAGTTTTTTACTTGTGGATTTTCAGTAAGGTTTGGAGTTGGGTTTGTGAGTTCATTGGTCCTTCAGCGCTTCGATGGTTGAACGAAAATAAGTCGTTTTGGAACGTTGCGTTTCGTTGTGGATGGGGTTTCTTGTGGTCAATGTATGTTTGTTGCATTTTGTTTGGACTTTTGGTTTCATCGCTTGTGTTTAGTGGGTTTTTGGTGAAGGGTTTGGTGGAAAAGCCGTTTCAGATGAAGCAAGTTTTGAATTTTGATTATACTAAACAGAGTCCTGTTGCATTTGTTCCTATAACATCGTGTTCTGGTGTTGGTGGTGAGGATCGGACGGATGAGAATGACATTGCTGTTGATAGGTGGGTGAATAAAAGGGTTATCCCTTCTAAACAAAAAGTGCAGCTCACTGTTTCATTGCTAGTGCCGGAGTCGGGATACAACACAAAACTTGGTGTCTTTCAGATCAGGGTAGACTTCTTATCTTCTAACGGTAAAATAATAACAAGTTCGAGGCAACCTTGCATGTTAAGATTCAGAAGTGAGCCTATCCGCCTAGTCACGACTTTCCTCAAGATTGTTCCGCTGCTTACTGGTTATATATCAGAGACTCAGACCCTGGATGCCAAGATGAATGATTTTGTTGAAGGGGATGTACCTACTTCATGCTTAAAAGTAACCCTTGAACAGCGAGCAGAATATCTACCTGGAGGTGGCATTCCTCAAATATATGATTCATCTATATTAGTTGAATCAAAACTTCCTTTGATCAAGAGGGTTTTATGGTATTGGAAGATTAGCTTATTTATATGGATTGCGATGATGGTATTCGTGATGGAGCTGCTCTTTGTTCTTGTGTGCTGTTGGCCTATGATTATTCCAAGAACCAGACAAAGGAGTGGTTCTGCTCGCCGTACTAGTAGCCAAAACAATCTCCAGGCATCGAGTTGA 1677 0.4192 FVLVYTFLLEKENHQFHTPICILHRQLTTSSIRASKNEQPLETSQSSMDTNSQYDDVFFDASHQCPFHHCSGTTHHTMPESPPSSSGQCDPDPLSSPSSTKLRRRSFHRPLPDKESPDTVSGTNLNNPEITKSQNHAVLKEIENFSEEGKFHLSPSPSGVIGEDINDESTLTTVTHDETLGDSAESPGELNDLSSNLLDYATGLVIRLIMFQIRVFFMLMKSPVSFMFHAWMFCIDPFGTMRKGKVFYLWIFSKVWSWVCEFIGPSALRWLNENKSFWNVAFRCGWGFLWSMYVCCILFGLLVSSLVFSGFLVKGLVEKPFQMKQVLNFDYTKQSPVAFVPITSCSGVGGEDRTDENDIAVDRWVNKRVIPSKQKVQLTVSLLVPESGYNTKLGVFQIRVDFLSSNGKIITSSRQPCMLRFRSEPIRLVTTFLKIVPLLTGYISETQTLDAKMNDFVEGDVPTSCLKVTLEQRAEYLPGGGIPQIYDSSILVESKLPLIKRVLWYWKISLFIWIAMMVFVMELLFVLVCCWPMIIPRTRQRSGSARRTSSQNNLQASS 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05331 558 PANTHER BERNARDINELLI-SEIP CONGENITAL LIPODYSTROPHY 2 HOMOLOG BSCL2 PROTEIN 133 557 IPR009617 GO:0019915
Vivi5g05331 558 MobiDBLite consensus disorder prediction 117 134 - -
Vivi5g05331 558 Pfam Putative adipose-regulatory protein (Seipin) 301 519 IPR009617 GO:0019915
Vivi5g05331 558 MobiDBLite consensus disorder prediction 74 134 - -
Vivi5g05331 558 MobiDBLite consensus disorder prediction 74 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05331 Vivi-Chr5 155439206 155442221 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05331 K19365 - vvo:131605802 1127.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05331 5 155439206 155442221 Vivi5g05331 5 155439206 155442221 ECH
Vivi5g05331 5 155439206 155442221 Vivi5g05331 5 155439206 155442221 PCT