Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05184 ATGGAAATGGTGCCAAGGAAGATGCAATCTAGAGCTATCCGCCACATTTTTTCGGCTTCAGATGACACGGTTATGACGAAACAAATTCGCGCAACTCATGCTCCTATTGAAGAACATGTGGATGCTAGACCTCTACTTAATATTGTTCAAGACATTTTTCATCGCGCGGCTTCTCTTAACCCCGAATTTGTTCAGGACATGAAGGATAATAATACTAAGGAATCTGACTTGTTTGAAATGCTGGAGATTTCATATCACTCAATTAACAAAATTTCGTGCGAGATATCTTGCAAGTGTTTGATGAGTGGAGGAGATGCTCATGCAACAACCATAGGAATACTTGGAATGCTATCAAGCTATTCATGGGATGCCAAAGTGGTGATAGCATTAGCAGCATTTGCAGCCAACTTAGGAGAATTTTGGCTTGTTGCTCAACTTCACGCCACCAACCGTCTTGCTAAGTCGGTTGCATTGTTGAAGCACATTCATGAAACACTGAATCAAGTTGATGACTTGGGGCCTAAATTTGAATCTGTCAACAACCTTCTCAAGGCAATGTTGGAGGTTGCTAATTGCATTGTTGAGTTTCATGAGCTTCCTTCTGAGTATATTGATCATGAAGCACCTGAAACATTGACTGCTTCCACTCTTATTCCTAGTGCTGTTTATTGGACCATTAGAAGTATTGTGGCATGTGCATCACATATTTTAGGCATTGTTGGCTTGGGTCAAGGATATATGACATCAACAATTGAGACATGGGAGCTTTCAAGTTTGACTCATAAGCTAGAAAGCTTGTATGGTCACCTTCAAAAGCTGCTAACAATTTGTCGTCAACATTTAGATGACAATAAACAGAGAGAAGTATTTGAAACACTTCAGCACCTTTTTGAGACTTCACACCAAGATAACATTAAGGTTCTCAAAGCTTTGATTCACTGCAAGGGTGATCCATTGCCAGTGTTTGATGGTTCCACAAAGCAAAGGGTTAGCATTGAGGCATTGAGGAAGAAAATTGTGCTGCTCTACATAACAGACCTGCACAATATATCTGACCAAGAGCTAGTGATTTTTGAACAAATGTATCAAGAGTCGCGTCTAGATTCAACGAGGATAGAGAGTCAATACGAACTCGTTTGGATTCCGGTTGTGGAAAAGGGAACTGCGTGGACCGAATCAAAGCAGAAGTTCGAGAGGCTGCAATCAATGATGCCATGGTACTCAGTTTATGACCCTTCACTTTTGGAGGCAGCAACCATTAGGTACATTAAGGAGGTATGGCTTTTCAACACAAAGCCAATGCTTGTGGTGTTGGATCCACAAGGTAAGGTTGTGAACCTGAATGCAATACATATGATGTGGATTTGGGGAAGCATGGCTTATCCTTTTTCTAGCTTAAGGGAGGAAGCTCTTTGGAAAGAAGAAACATGGGGACTTGCACTATTGGCCGATACAATCGATCCATTGCTCTTTGATTGGGTATCAGCAGGAAAGTACATATGTTTGTATGGAGGGGACGATATGGATTGGATCCGTAAATTCACAAGCGCGGCAAAATCCATGGCAAGAACTCTACGAATTCCACTCGAAATGATGTATGTAGGAAAAGCCAACCCTGGACAAAAAGTTAGAAAAATCAACAAGTCCATATATGAAGAAAATCTAAGCAACATCCTAGCCGACCCAACGATAATTTGGTTCTTTTGGGTTAGGCTAGAAAGCATGTGGCACTCCAAATTACAACAAAACAAGACAGTGGAAACTGACCAAATAATGATGGAAATAATGAGAATCCTAAGCTATGATAGCAGTGATCAAGGTTGGGCTGTGATAAGTCAAGGAACAATAAAAATGACCCAAGGCAAAGGCGACTCGTTTTTGAAGTGTGTTAATGAGTTTGATGAGTGGAAGGATAATGTGAATGAGAAAGGAGTTTTGCCTGCAATGGATGAGTATATACAAGGAATCCAACAGCCACACCATTGTAATAGATTGATACTGCCAGGAGTTGATGGCACAGTTCCAGATAAGATTGTGTGTGCTGAATGTGGTAAACCAATGGAGAAGTTCTACATGTATCGCTGCTGCAACGAATGA 2097 0.4101 MEMVPRKMQSRAIRHIFSASDDTVMTKQIRATHAPIEEHVDARPLLNIVQDIFHRAASLNPEFVQDMKDNNTKESDLFEMLEISYHSINKISCEISCKCLMSGGDAHATTIGILGMLSSYSWDAKVVIALAAFAANLGEFWLVAQLHATNRLAKSVALLKHIHETLNQVDDLGPKFESVNNLLKAMLEVANCIVEFHELPSEYIDHEAPETLTASTLIPSAVYWTIRSIVACASHILGIVGLGQGYMTSTIETWELSSLTHKLESLYGHLQKLLTICRQHLDDNKQREVFETLQHLFETSHQDNIKVLKALIHCKGDPLPVFDGSTKQRVSIEALRKKIVLLYITDLHNISDQELVIFEQMYQESRLDSTRIESQYELVWIPVVEKGTAWTESKQKFERLQSMMPWYSVYDPSLLEAATIRYIKEVWLFNTKPMLVVLDPQGKVVNLNAIHMMWIWGSMAYPFSSLREEALWKEETWGLALLADTIDPLLFDWVSAGKYICLYGGDDMDWIRKFTSAAKSMARTLRIPLEMMYVGKANPGQKVRKINKSIYEENLSNILADPTIIWFFWVRLESMWHSKLQQNKTVETDQIMMEIMRILSYDSSDQGWAVISQGTIKMTQGKGDSFLKCVNEFDEWKDNVNEKGVLPAMDEYIQGIQQPHHCNRLILPGVDGTVPDKIVCAECGKPMEKFYMYRCCNE 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05184 698 Pfam Sieve element occlusion N-terminus 20 301 IPR027942 -
Vivi5g05184 698 Pfam Sieve element occlusion C-terminus 467 697 IPR027944 -
Vivi5g05184 698 Gene3D Glutaredoxin 322 463 - -
Vivi5g05184 698 PANTHER PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE 9 697 IPR039299 GO:0010088
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05184 Vivi-Chr5 153037630 153041006 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05184 - - gmx:100799626 1094.34
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05184 5 153037630 153041006 Vivi5g05184 5 153037630 153041006 ECH