Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05179 ATGTCTCGTCGAGAAACCAACCCTCACTTTTCGAGACCACTGCGACCCCAGAATGCAGATCAGCAGCAGCCAAATATTCCAACAGTGCCACACCAATACCACCATGGCGAACCATCTATTCCTGTAGCAGCACCTATACAAGACGTATCTCAGCATCCCCAACCTCATTTTCCATTGCCACGCCATCATGAAGATCAGGTTCCATTGCGTGCAGATAATGATAGTCGTTTTCCACACCACCCTGAAGATCGCGTTCCATTGCGGACAGATCATGATAGTCGTTTTCCATACCCCCTTGAGCAAGAAGGTCATCATCAACCACCTAGTTTACAAGTTCCACGAAGGGGGGGAAACCGCATCAGCCAACCACCGCGTGGAGGCTCGCGCAAAAAGCCTCGAGATCAGGATCTTCGGCCAAGTAAGTCAAGGGTAAATTTTCAAGAGCCATCAGTCATATCACCACCACCACTTGATCATCCTCCCGAACCTCGGCGGCAGCTAGCACCACGCCAAGATCGGCGTCATGGTGGTATAAGGTTTCCTGTAGAACAAAAGTCACCACCTTTAACTTGGTTATGTGCTTGCTTGTGTGTAATATTTTGGCTTATCATAATCATAGGAGGCTTAATAGTACTCATAGTGTACTTGGTTTTTCGTCCACAAATTCCTCATTTTGATGTGTCTAGTGTCACACTAAATGCTGCATACCTTGATGTTGGTTATCTACTCAATGCTGATTTAACGATGCTGACAAATTTCACAAATCCAAACAAGAAAGTACATGTGGATTTCAGCTCAGTGATCATTTATCTGTACTATGGAAGTACCCTTATTGCTTCTCAATATGTTGAGCCTTTCTCAGCTGCAAGGGTCCAGTCAAGATTTGCATATATACATATGGTAACTAGTCAAGTTCAGCTGCCATTAAATGAGGCACAGAGGCTTGTGAAACAAATGGAAAGCAATGGTGTTTTGCTTGAAGTGAGGGGAGTTTTCAGAGCAAGATCAAAACTAGGAACCATCTTAAGGTATTCATATAACCTTTATGGCCGTTGCAGTATCATGGTGGCACGCCCTCCAGAAGGGATATTGATAAGAAAGAAGTGCAGAACGAAACGATGA 1122 0.4465 MSRRETNPHFSRPLRPQNADQQQPNIPTVPHQYHHGEPSIPVAAPIQDVSQHPQPHFPLPRHHEDQVPLRADNDSRFPHHPEDRVPLRTDHDSRFPYPLEQEGHHQPPSLQVPRRGGNRISQPPRGGSRKKPRDQDLRPSKSRVNFQEPSVISPPPLDHPPEPRRQLAPRQDRRHGGIRFPVEQKSPPLTWLCACLCVIFWLIIIIGGLIVLIVYLVFRPQIPHFDVSSVTLNAAYLDVGYLLNADLTMLTNFTNPNKKVHVDFSSVIIYLYYGSTLIASQYVEPFSAARVQSRFAYIHMVTSQVQLPLNEAQRLVKQMESNGVLLEVRGVFRARSKLGTILRYSYNLYGRCSIMVARPPEGILIRKKCRTKR 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05179 373 MobiDBLite consensus disorder prediction 57 99 - -
Vivi5g05179 373 MobiDBLite consensus disorder prediction 127 141 - -
Vivi5g05179 373 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 174 357 - -
Vivi5g05179 373 MobiDBLite consensus disorder prediction 163 179 - -
Vivi5g05179 373 MobiDBLite consensus disorder prediction 1 179 - -
Vivi5g05179 373 MobiDBLite consensus disorder prediction 11 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05179 Vivi-Chr5 152997808 152999242 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05179 - - psat:127104560 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05179 5 152997808 152999242 Vivi5g05179 5 152997808 152999242 ECH