Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05166 ATGGGGACCAGTACTCGCAGTTTGTGTCTTGTTTGCTGCAGTTCTACCAATAGAAAACCAAATGAAAGTATGAGGCTTGTTCTGACAACTTTTGCTGGAATACTTTTTGGCTTCTTTATTGGGATTTCATATCCAACGTTAACTACAAAGTTGAATGTCTCATCTAACCTGCTTCCCTCCATTGACGTGTCTTCCCTTGAAGACGAATATGAAAGTGGCAATGCTCGGTCTTTTATGAAGAATAATAGCAGCGACTCATCAAAATATCAGTTATTAAATGACACGTTGAAGATTTGGATTCCATCAAATCCAAGAGGTGCAGAAAGATTACCTCCTGCGATAATTGAAGCTGAGTCAGACTTTTATTTGCGTAGATTGTGGGGTCAGCCTAGCGAGGATTTAACCTCAAAGCCTAAATACCTCGTGACCTTCACTGTCGGTTATGATCAGAAACATAATATTGATGCAGCTGTGAAAAAGTTTTCAGGGAATTTCACAATTCTTTTGTTTCATTATGATGGCCGAACAACTGAATGGAATGAGTTTGAATGGTCAAAGCAGGCTATTCACGTGAGTGTTCACAAACAGACGAAATGGTGGTATGCTAAACGGTTTCTGCATCCTGACATTGTGGCACCATATGACTATATTTTTATATGGGATGAAGATCTGGGTGTTGAGCATTTTAATGCAGAGGAATACTTAAGACTAGTGAGGAAGCATGGGTTGGAGATTTCACAGCCTGGTTTGGAACCTAATAGTGGACTGACATGGCAAATGACTAAGAGAAGAGGTGATCGGGAAGTTCACAAAGAAACAGAGGAGAAACCAGGATGGTGCAGTGATCCTCATCTGCCTCCTTGTGCAGCGTTTGTTGAGATTATGGCTCCAGTTTTTTCACGTGATGCATGGCGCTGTGTGTGGCATATGATTCAGAATGACTTGGTCCATGGGTGGGGTCTTGACTTTGCTCTTAGAAAATGTGTTGACCCGGCCCATGATAAGATAGGAGTTGTTGATTCTCAGTGGATCATTCATCAAAGTATCCCCTCACTAGGGAATCAGGGAGAATCAACTTCTGGACAAGCGCCATGGCAGGGGGTGAGGGAAAGGTGTAGAAAGGAGTGGACAATGTTCCAGAGTCGGATGGCAAGTGCAGAAAATGCATATTACAAGGCCGTGGGAATTGATTTGTTTAATTCAACTAATCCTTAG 1215 0.4222 MGTSTRSLCLVCCSSTNRKPNESMRLVLTTFAGILFGFFIGISYPTLTTKLNVSSNLLPSIDVSSLEDEYESGNARSFMKNNSSDSSKYQLLNDTLKIWIPSNPRGAERLPPAIIEAESDFYLRRLWGQPSEDLTSKPKYLVTFTVGYDQKHNIDAAVKKFSGNFTILLFHYDGRTTEWNEFEWSKQAIHVSVHKQTKWWYAKRFLHPDIVAPYDYIFIWDEDLGVEHFNAEEYLRLVRKHGLEISQPGLEPNSGLTWQMTKRRGDREVHKETEEKPGWCSDPHLPPCAAFVEIMAPVFSRDAWRCVWHMIQNDLVHGWGLDFALRKCVDPAHDKIGVVDSQWIIHQSIPSLGNQGESTSGQAPWQGVRERCRKEWTMFQSRMASAENAYYKAVGIDLFNSTNP 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05166 404 PANTHER OS06G0731900 PROTEIN 17 393 IPR007877 -
Vivi5g05166 404 Pfam Protein of unknown function (DUF707) 102 388 IPR007877 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05166 Vivi-Chr5 152829706 152836698 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05166 - - cam:101498964 760.37
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05166 5 152829706 152836698 Vivi5g05166 5 152829706 152836698 ECH