Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05125 ATGTTGAATGAAGGGAATGAAAATGTTTTAAAGGGAGGAAGTGGAGGCAAATCAGGGAAGATGGTGTCTCCAAACAACAAAGAATTTATGTTCATATGTTTTCTTGTGTCTCTTTGGTACTCATCAAACATTGGTGTTATTCTTCTCAACAAATACCTTCTCTCAAATTATGGTTTCAAGTTCCCAATCTTCCTTACAATGTGTCACATGTCAGCTTGTGCTATTTTTAGCTACATCTCCATTGTGTTCTTCAAGGTTGTTCCTCAACAGATGATTAAATCGAGGTCGCAGTTCTTAAAGATTGCAACTTTGAGCATTGTTTTCTGTGGGTCGGTGGTTGGTGGCAACATTTCTCTCAGGTATTTGGCTGTTTCTTTTAACCAAGCGGTGGGTGCAACCACACCTTTCTTCACGGCTGTTTTTGCTTATTTGGCTACCTTTAAGAGAGAAGCTTGGATTACATATGCTGCTCTTGTTCCTGTTGTTGCTGGTGTTGTCATTGCAAGTGGGGGCGAGCCAGGGTTTCATGTATTCGGATTTCTTATGTGCCTAAGTGCAACCGCTGCAAGAGCTTTCAAATCTGTTCTTCAGGGCATTTTACTTTCTTCTGAAGGGGAGAAGTTGAACTCAATGAATTTGCTCCTGTATATGTCTCCGATCGCAGTCGTACTTTTGTTGCCTGCAGCGCTTATCATGGAGCCAAATGTTATAGATGTCACATTAACCCTTGGAAAGGAACATAAATTTATGGGCGTGCTTCTTCTTCTTAACTCCGCCACAGCATATGCAGCAAACTTAACAAACTTCCTGGTGACAAAACATACAAGTGCTTTGACACTCCAGGTATTAGGCAATGCAAAAGGTGCTGTAGCTGTTGTTATCTCAATACTGATATTCAGAAACCCTGTCACTTTTATCGGCATGGCTGGCTACGCAGTTACTGTAATGGGAGTTGTTGCATATGGAGAAACAAAAAGGAGGTTTAGATGA 990 0.4121 MLNEGNENVLKGGSGGKSGKMVSPNNKEFMFICFLVSLWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMSACAIFSYISIVFFKVVPQQMIKSRSQFLKIATLSIVFCGSVVGGNISLRYLAVSFNQAVGATTPFFTAVFAYLATFKREAWITYAALVPVVAGVVIASGGEPGFHVFGFLMCLSATAARAFKSVLQGILLSSEGEKLNSMNLLLYMSPIAVVLLLPAALIMEPNVIDVTLTLGKEHKFMGVLLLLNSATAYAANLTNFLVTKHTSALTLQVLGNAKGAVAVVISILIFRNPVTFIGMAGYAVTVMGVVAYGETKRRFR 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05125 329 PANTHER SOLUTE CARRIER FAMILY 35 33 324 - -
Vivi5g05125 329 Pfam Triose-phosphate Transporter family 32 321 IPR004853 -
Vivi5g05125 329 SUPERFAMILY Multidrug resistance efflux transporter EmrE 218 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05125 Vivi-Chr5 152062830 152066072 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g05125 21 329 Organic Solute Cotransporters AT5G04160 81.553 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05125 - - gmx:100782949 543.502