Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05075 ATGTTCATAGAGAGTTTCAAGGTTGAGAGTCCCAACGTGAAGTACACAGAGACAGAGATTCAATCTGTGTACAATTATGAAACAACTGAACTTGTTCATGAGAACAGAAATGACACTTATCAATGGGTTGTTAAGCCTAAAACTGTGAAATATGAGTTTAAAACACAAACTAATGTCCCTAAATTGGGGGTAATGCTTGTTGGGTGGGGTGGAAACAATGGTTCAACACTCACTGGTGGTGTTATTGCAAACAGAGAGGGTATTTCATGGGCAACAAAGGACAAGATTGAACAAGCCAATTATTTTGGTTCACTGACCCAAGCATCAGCTATCAGAGTGGGGTCTATTCAAGGAGAGGAAATTTATGCCCCTTTCAAGAGCCTTCTTCCTATGGTAAACCCTGAGGATATTGTATGGGGAGGATGGGATATAAGTGACATGAACCTAGCTGATGCCATGGGGAGGGCCAAGGTATTTGACATAGACCTACAGAAACAATTGAGACCTTACATGGAATCCATGGTTCCTCTTCCTGGAATCTATGATCCTGATTTCATTGCTGCTAATCAAGGAGATCGTGCCAATAACATCATCAAAGGAACAAAGAAAGAACAACTCCAACAAGTCATCAAAGACATTAAGGAGTTTAAGGAAGCTAACAAGGTTGACAAGGTTGTTGTACTGTGGACTGCAAACACTGAGAGGTATAGTAACGTTGTGGTGGGACTAAATGACACTACAGAAAATCTCTTGGCTTCTGTGGACAAGAATGAATCTGAGATTTCACCTTCAACCCTTTTTGCTTTGGCTTGTGTCCTTGAAAATGTTCCTTTCATCAATGGAAGCCCCCAAAATACCTTTGTCCCAGGGTTGATTGATCTGGCCATCAAAAGGAACAGTTTGATTGGTGGAGATGATTTCAAGAGTGGTCAGACAAAAATGAAGTCTGTGTTGGTCGATTTCCTCGTAGGAGCTGGTATCAAACCAACCTCGATAGTGAGTTACAACCATTTGGGAAACAATGATGGAATGAATCTCTCTGCACCGCAAACCTTCCGCTCGAAGGAAATCTCTAAGAGCAACGTTGTCGATGACATGGTTAACAGCAATGCTATTCTCTATGCTCCTGGTGAACATCCAGACCATGTTGTTGTAATTAAGTATGTGCCTTATGTGGCTGACAGCAAGAGAGCAATGGATGAGTACACTTCTGAGATATTCATGGGTGGAAAGAACACAATTGTGATGCATAACACATGTGAAGATTCGCTTTTGGCTGCTCCGATTATCTTGGACTTAGTTCTTCTTGCTGAACTTAGTACTCGAATTCAGCTCAAATCTGAACACGAGAACAAGTTTCACTCGTTCCACCCTGTGGCAACCATCCTGAGTTATCTCACTAAGGCTCCTCTTGTTCCTCCGGGTACACCGGTAGTGAATGCGCTGTCAAAGCAGAGATCTATGCTGGAGAATATAATGAGAGCTTGTGTTGGATTGGCTCCGGAGAACAATATGATTCTGGAATACAAGTGA 1533 0.422 MFIESFKVESPNVKYTETEIQSVYNYETTELVHENRNDTYQWVVKPKTVKYEFKTQTNVPKLGVMLVGWGGNNGSTLTGGVIANREGISWATKDKIEQANYFGSLTQASAIRVGSIQGEEIYAPFKSLLPMVNPEDIVWGGWDISDMNLADAMGRAKVFDIDLQKQLRPYMESMVPLPGIYDPDFIAANQGDRANNIIKGTKKEQLQQVIKDIKEFKEANKVDKVVVLWTANTERYSNVVVGLNDTTENLLASVDKNESEISPSTLFALACVLENVPFINGSPQNTFVPGLIDLAIKRNSLIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKSNVVDDMVNSNAILYAPGEHPDHVVVIKYVPYVADSKRAMDEYTSEIFMGGKNTIVMHNTCEDSLLAAPIILDLVLLAELSTRIQLKSEHENKFHSFHPVATILSYLTKAPLVPPGTPVVNALSKQRSMLENIMRACVGLAPENNMILEYK 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05075 510 Pfam Myo-inositol-1-phosphate synthase 62 494 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vivi5g05075 510 Pfam Myo-inositol-1-phosphate synthase 310 423 IPR013021 -
Vivi5g05075 510 FunFam inositol-3-phosphate synthase 382 510 - -
Vivi5g05075 510 FunFam Inositol 1-phosphate synthase 314 419 - -
Vivi5g05075 510 PIRSF Myoinositol-ppht_synth 50 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vivi5g05075 510 FunFam Inositol-3-phosphate synthase 1 1 356 - -
Vivi5g05075 510 Gene3D - 1 355 - -
Vivi5g05075 510 Gene3D - 373 510 - -
Vivi5g05075 510 PANTHER MYO-INOSITOL-1 PHOSPHATE SYNTHASE 1 510 IPR002587 GO:0004512|GO:0006021|GO:0008654
Vivi5g05075 510 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 510 IPR036291 -
Vivi5g05075 510 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 309 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05075 Vivi-Chr5 151485193 151488112 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05075 K01858 - gmx:100800820 964.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05075 5 151485193 151488112 Vivi5g05075 5 151485193 151488112 ECH
Vivi5g05075 5 151485193 151488112 Vivi3g03139 3 53327274 53330664 PCT