Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05066 ATGGGAGTTGGTGGAACTTTGGACTACTTGTCTGATCTAATGAGCAGTGGTCACCAGCACCTCAAGAAGAAGAAGAAGCAGTTACAAACTGTAGAGCTAAAGGTTAGGATGGACTGTGATGGCTGTGAGCTCAAGGTCAAGAAAACCCTTTCATCTCTAAGTGGGGTAAAATCGGTAGAGATAAACCGTAAACAGCAAAAAGTAACAGTAACTGGGTTTGTGGAGCCAAACAAGGTGCTAAAGAAGGCTAAGTCAACGGGGAAGAAGGCTGAAATTTGGCCCTATGTGCCTTACAACTTGGTGGCTCAACCATATGCTGTTTCTTCTTATGACAAGAGGGCTCCTCCTGGTTATGTGAGGAGAGTGGAGAATGCTCCAGCCACTGGGACCATGACAAGATATGAAGATCCTTATGTCAACATGTTCAGTGATGAAAACCCAAATGCATGTTCTGTCATGTAA 462 0.4437 MGVGGTLDYLSDLMSSGHQHLKKKKKQLQTVELKVRMDCDGCELKVKKTLSSLSGVKSVEINRKQQKVTVTGFVEPNKVLKKAKSTGKKAEIWPYVPYNLVAQPYAVSSYDKRAPPGYVRRVENAPATGTMTRYEDPYVNMFSDENPNACSVM 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05066 153 SUPERFAMILY HMA, heavy metal-associated domain 28 94 IPR036163 GO:0046872
Vivi5g05066 153 ProSiteProfiles Heavy-metal-associated domain profile. 28 91 IPR006121 GO:0046872
Vivi5g05066 153 Pfam Heavy-metal-associated domain 34 89 IPR006121 GO:0046872
Vivi5g05066 153 Gene3D - 16 94 - -
Vivi5g05066 153 PANTHER COPPER TRANSPORT PROTEIN ATOX1-RELATED 30 151 IPR045181 GO:0046872
Vivi5g05066 153 CDD HMA 32 91 IPR006121 GO:0046872
Vivi5g05066 153 FunFam Heavy metal-associated isoprenylated plant protein 26 18 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05066 Vivi-Chr5 151383060 151384301 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05066 - - gmx:100500473 268.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05066 5 151383060 151384301 Vivi5g05066 5 151383060 151384301 ECH
Vivi5g05066 5 151383060 151384301 Vivi3g04449 3 80064144 80064970 PCT