Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g05026 ATGCCTCTCGAAGGGGAACTCGAAGTGATATCGCAAGAAATGGTGGAATCTGGTGACGATTTAGGTCAATTTGATGCACGGTTTGTGCCTATATGTGCTTCTTTAATCCTTTCAAATGATTATCCCTTTGATTTTTTTGAGCGCGGTCCAGTAAAGCAATTCACCAACGTCTTAAATCCAGATGTTGTTGTGCCTCCTATAAATGCTATTAAGGCTTATATCTTTGATTTGTACATGAAAGAGAAACTCAAGCTTAAACAGGAATTGGCTAACATTCCTAATAGGATATCTTTAACTGTTGATTTGTGGGAATCTTGCACTACTGAGACTTATATTTGTTTAACTGCTCATTTCGTTGATGCGAATTGGAAGTTGAATAGTAAGGTTCTCACTTTTTGCACTGTTGATCCTTGTGGAGATGAGATGTGTGAGAGAATGCTTGAGTTTTTGAGTGATTGGGGAATAGAGAAAAAGGTTTTTTCTCTCACTTTAGATGATTCATCTGAGAATGACATTTTGCAAGAAAAATTGAAAGCTCAACTTGGTTTGCAAAATGGTTTGTTGTGTGATGGAGAGTTCTTTCATGTGCATTGTTTTGCACGTGTTTTGAAACTGATTGTCCAGGAGGGATTAAAACTGGTTAGTGATGCCGTGTGTAAAATTAGAGAGAGCATCTTGTTTATGAGGGATTCTAAAAGTAGAAGGGAAAAGTTTAAGGAGTGTGTTGAAAAGGTTGGTGGTGTTGATAGTTCTGTTCGCTTGCATCTGGATATGTCTATGACTGTGAACTCAACTTATTTGATGCTTCAAAGTGCTCTTAAATATAGGTGTGTGTTTGAAAATTTTCATTTGTACGATGATGATTTTGAGTTGTGTCCTTCAGTAGAAGAGTGGAAAAGAGTAGAAAAGATTTGTGCATTCTTGTTGCCATTTTGGGAAACTGCTAACATGATTAATGGCACAACACATCCTACTTCAAACTTGTATTTTTTGCAAGTTTGGAAAGTTCAATGTGTTCTAGTTGATAGTTTGAGAGATGAAGATGGACTTATAAAGGGGATGGTGGAAAGGATGATGAGTAAGTTTGAGAAATATTGGGATGAGTATAGTGTGGTTGTTGCTTTAGGAGCGGTTCTTGACCCAAGGATGAAGTTTTCAACATTGGCTTATTGTTACTCAAAACTTGATGCATCAACCTGTGAAAGGAAGTTGCAACAAGTAAAAGAGAAGTTGTACATGCTATTTGACAAGTATACTGGCAAACGTACTTCTGCTGGTGTGCAAAGAACTGTTCGGGACCAATCTTCTAGCATGCCATTGCAAAAGAAATTGAAGTCTTTACCTCTTGGCATATTTGATGAATTGAAAATGCACCATCATCAGCTTGTGACTGAAACTGGAAAGTCTGAACTTGATGTTTACTTAGATGAGTCAAATTTGGATTTTCGTTGTAATGAAGATATGGATGTATTACAATGGTGGAAGAGTAACAAGAATCGATTTCCAGATCTATCAATATTGGCTTGCGACTTGTTAAGTGTTCCCATTACAACTGTTGCTTCAGATCTTGATTTTTGCATGGGATTACGTGTCTTTAACAAGTATAAAAATCGTATGTTGCCAATGAACATGGATGCTAGATTTTGTACTCGCAGTTGGTTGTACAATTTTGTTAGCAATGATGGAGTTGACGACGATGACTTTGAAGAAATAATGAATGAAATTGACGCAGATGATAAAATGGAGCAAGCATCTAACAATTCTGATTCTGAAGATGACGACGATGGTGATGATGATTGA 1800 0.3689 MPLEGELEVISQEMVESGDDLGQFDARFVPICASLILSNDYPFDFFERGPVKQFTNVLNPDVVVPPINAIKAYIFDLYMKEKLKLKQELANIPNRISLTVDLWESCTTETYICLTAHFVDANWKLNSKVLTFCTVDPCGDEMCERMLEFLSDWGIEKKVFSLTLDDSSENDILQEKLKAQLGLQNGLLCDGEFFHVHCFARVLKLIVQEGLKLVSDAVCKIRESILFMRDSKSRREKFKECVEKVGGVDSSVRLHLDMSMTVNSTYLMLQSALKYRCVFENFHLYDDDFELCPSVEEWKRVEKICAFLLPFWETANMINGTTHPTSNLYFLQVWKVQCVLVDSLRDEDGLIKGMVERMMSKFEKYWDEYSVVVALGAVLDPRMKFSTLAYCYSKLDASTCERKLQQVKEKLYMLFDKYTGKRTSAGVQRTVRDQSSSMPLQKKLKSLPLGIFDELKMHHHQLVTETGKSELDVYLDESNLDFRCNEDMDVLQWWKSNKNRFPDLSILACDLLSVPITTVASDLDFCMGLRVFNKYKNRMLPMNMDARFCTRSWLYNFVSNDGVDDDDFEEIMNEIDADDKMEQASNNSDSEDDDDGDDD 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g05026 599 Pfam hAT family C-terminal dimerisation region 470 554 IPR008906 GO:0046983
Vivi5g05026 599 PANTHER BED FINGER-RELATED 74 555 IPR045259 -
Vivi5g05026 599 Pfam Domain of unknown function (DUF4413) 321 418 IPR025525 GO:0003677
Vivi5g05026 599 SUPERFAMILY Ribonuclease H-like 84 554 IPR012337 -
Vivi5g05026 599 MobiDBLite consensus disorder prediction 568 599 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g05026 Vivi-Chr5 150907602 150910077 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g05026 - - tpra:123915793 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g05026 5 150907602 150910077 Vivi5g05026 5 150907602 150910077 ECH