Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04984 ATGGCAAGTAAGCAACAAAGATGTAACCATTGTGGAATACTACTATTTATTCCACAAGAAGTTCAAGCCTTTAAGTGTTCAATGTGCAATGGCATCACACATGTTCAATCCCCAGGTCCAATGAATCAAGCCTATAACTCTCTTAATCATATTGCAGGTCTTTTTAGAGGCTTCATGAATACTATAACAACTAGTTCAGCAATCAACAGCAATTCAGGTAATTATGGAACAAATCAGTTTGGGTATTATCCTCGGCCTCAGCCACAAAGGCCTTTGAATCCTCCTTCCCCATATGGTTCAAAAAGGGCAGTTTTGTGTGGAATCTGCTATCATGGAAGGAGTTACAGGCTTAAGGGCTCCATCAATGATGTGAAGTGTATGAAATATTTTCTGATCAAGGAGTTTGGGTTTCCAAGTGATTCCATTTTCATGCTCACAGATGATAAGGAGGAGAGAAATCCACTGAAAATCCCAACAAAATATAACATTCAAATGGCTTTAAGGTGGCTGATTGAGGGTAGCAAATCAGGAGATTCACTGGTGTTCCATTACTCAGGACATGGCACACAGGAAGTGAACATGAATGAAATTGATCATAGCTATAAGTATAATAATGCAATTAGTCCTGTTGATCATGAGCTCAAGGGGAAGATACTGAATGATGAGATTAATGCAACAATTGTTAGGCCACTACCATTTGGTGCTAAACTTCATGCCATTATGGATGCATGTCACAGTGGGAATGTTCTTGATTTATCATTTGTGTGCAAGATGAACAGGGAAGGGTATTATACATGGGAGAATCATACGAGTTCAAGAAATTATAAAGACACAAAAGGAGGGGTAGCAATTTGTATTTCAGCTTGTGAAGATGGTCAAGTCTCTGTAGATACCTCTGCCTTGAGTGGCAAAGAAGTTACAGGTGCTTTGACTTATAGTTTCATACAAACAGTGCAAAATGAACCTGGGTTGACTTATGGTCAATTGCTTAGTACCATGCGTTCTACCATTCATGGGACAAAAACAGGCATAGTTACACTAAATGGACCAATTGCTTCACTCTTAAATAGACTTCTTGGCCTACGCATCAAACAGGAGGCACAATTATCATCCTCGGAGTTGTTTGACATGTATAAGAAGCAGTTTATACTATGA 1155 0.3896 MASKQQRCNHCGILLFIPQEVQAFKCSMCNGITHVQSPGPMNQAYNSLNHIAGLFRGFMNTITTSSAINSNSGNYGTNQFGYYPRPQPQRPLNPPSPYGSKRAVLCGICYHGRSYRLKGSINDVKCMKYFLIKEFGFPSDSIFMLTDDKEERNPLKIPTKYNIQMALRWLIEGSKSGDSLVFHYSGHGTQEVNMNEIDHSYKYNNAISPVDHELKGKILNDEINATIVRPLPFGAKLHAIMDACHSGNVLDLSFVCKMNREGYYTWENHTSSRNYKDTKGGVAICISACEDGQVSVDTSALSGKEVTGALTYSFIQTVQNEPGLTYGQLLSTMRSTIHGTKTGIVTLNGPIASLLNRLLGLRIKQEAQLSSSELFDMYKKQFIL 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04984 384 PANTHER METACASPASE-4 97 383 - -
Vivi5g04984 384 Pfam Caspase domain 101 376 IPR011600 GO:0004197|GO:0006508
Vivi5g04984 384 Gene3D - 56 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04984 Vivi-Chr5 150354112 150356886 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04984 K22684 - gmx:100783197 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04984 5 150354112 150356886 Vivi5g04984 5 150354112 150356886 ECH
Vivi5g04984 5 150354112 150356886 Vivi5g04984 5 150354112 150356886 PCT