Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04701 ATGACTTCCACCATTCCCACTTCACCTTCCTTCTCCATCCTCTCCTTCAATCCAACAATTACCAACACTCCTTCTCAATTCCCCCCTAACCTCCCTCTCCGCCTCCGCCACCGTCGACTCACCGTCAAAGCCCACTCTTCCAACTCCCCTGTCATCCACCACCTCAAAAACATCGCCGGTGCAGCAGTCTTCGCCGCCGCAACCGCCACCGCCGCCCTCACATTTTCACCTTTCCCCGCCAGAGCTGAACCACCGCCCACACTCACCGAAGTCCTCCCGGAAACTGAAATCGAAACTGAAACAGACACAGCTCTCGCCGGCGGAGATACCGACACCGGAATAACATCGCCTCTGTCCGAATTCCTCGAAACAAACTATGAATCTTCATCACCGGAAGCTCTGAAGTCTCTTCTTCAGCAGAAGCTCGACCTCGGCGAGGACGAAGAGGCATTAAAGATCCTCAAACATCTGATCTCATCGCAACCAGAAGTATCAGACTGGAAGTTCCTCGCGGCGAGGTTAACTACTGAAATTGGAGATACTGATAGCGCGAGAAGTTTCTACGACGAAATCTTAAAGTCAAACCCGCTTTCATTCGAAGCGCTTTTTGAAAACGCGCTTTTGATGGACCGTTGCGGAGAAGGAGATGCCCTAATTGAACAGCTTGAAGATGCTATGAGAGTTGCTTTGGAAGACAACAAGGAAAAGGAAGGGAGGGATGTGAGATTGATAATTGCTCAGATTCTGTTTCTGCGGAAGAGTGTTGATGAAGCTTTGGGTTTGTATGAGATATTAATCAAAGAAGATCCTAATGATTTTAGGCCTTATTTTTGCAGGGGAGTGATTTATACATTGCTTGATAAGAATGATGAGGCGAAGGAGCAATTTGCAAAGTATAGGGAGTTGTCTCCTAAGAAGTTTGAGGTTGATGGTTACTTGAGAACACCTTTGTCAAAGATCAAAGATTTTGGTACTGATCAAAGCTAG 987 0.4752 MTSTIPTSPSFSILSFNPTITNTPSQFPPNLPLRLRHRRLTVKAHSSNSPVIHHLKNIAGAAVFAAATATAALTFSPFPARAEPPPTLTEVLPETEIETETDTALAGGDTDTGITSPLSEFLETNYESSSPEALKSLLQQKLDLGEDEEALKILKHLISSQPEVSDWKFLAARLTTEIGDTDSARSFYDEILKSNPLSFEALFENALLMDRCGEGDALIEQLEDAMRVALEDNKEKEGRDVRLIIAQILFLRKSVDEALGLYEILIKEDPNDFRPYFCRGVIYTLLDKNDEAKEQFAKYRELSPKKFEVDGYLRTPLSKIKDFGTDQS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04701 328 PANTHER TRANSMEMBRANE PROTEIN 109 307 - -
Vivi5g04701 328 ProSiteProfiles TPR repeat profile. 273 306 IPR019734 GO:0005515
Vivi5g04701 328 SUPERFAMILY TPR-like 131 306 IPR011990 GO:0005515
Vivi5g04701 328 Coils Coil 219 239 - -
Vivi5g04701 328 Gene3D Tetratricopeptide repeat domain 105 315 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04701 Vivi-Chr5 145796884 145798514 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04701 - - psat:127100967 480.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04701 5 145796884 145798514 Vivi5g04701 5 145796884 145798514 ECH