Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04640 ATGGCTCCTTTTACAATTTCGACATTGCCTTCTTTAAATATTGGCCATTTTCGAAAGCCTTGTAATAGGATTCTTCCAATTCGCTGCTCCACGGCTGCTTCTCCTTCCTCGGTTTCTATCCGATCAAAAGCTGTTCACTTTGATTTGAAGACATACTGGACTTCCCTAATGGTGCAGATCAATCAGAAGCTTGATGAAGCAATTCCAGTTCAATTTCCTCAAAAGATATATGAAGCTATGAGGTATTCTTCCCTTGCTAAAGGCGCCAAGCGAGCCCCACCTGTTATGTGCATCTCTGCTTGTGAACTCTTTGGAGGCAGCCGCCTTGCTGCCTTCCCCACTGCCTGTGCCCTTGAAATGGTTCATGCTGCTTCATTGATACATGACGATCTTCCCTGTATGGATGACTCCTCATCACGCCGTGGCCAGCCCTCAAACCATACTATCTATGGTGTTGACATGGCAATTCTGGCGGGTGATGCATTATTTCCCCTTGGATTTCAACACATTGTTTCACATACTCCCACTGACCTTGTACCTGAGCCCCGTCTACTTCGTGTGATTGCTGAAATGGCCCGCTCTGTGGGCTCTACTGGTATGGCTGCAGGGCAGTTCTTGGACCTTGAAGGGGGTCCAAATGCAGTTGGATTTATACAAGATAAAAAGTTTGGTGAAATGGGGGAGTGTTCTGCAGTGTGTGGAGGTTTGTTGGCCGGTGCCAAAGATGATGAGATAGAGAGACTGAGGAGGTATGGTAGAGCTGTTGGAGTATTGTATGCAGTTGTGGATGATATTTTGGAAGAGAGATTGAAACCTGAGGGAGATAAAGATAGAAAAAACAAAGGGAAGAGTTATGTAGGCGTTTATGGGGTTGAAAAAGCAACAGAGATGGCTGAAGAACTGAGAGCAAAGGCTATGGAGGAATTGGATGGATTTGAGAAGTATGGAGATCAAGTGTTGCCTCTATACAGTTTCGTGAATTATGCTATTGATAGAAGCTTCAATGTTGATGACGCTAGTGGATGA 1026 0.4513 MAPFTISTLPSLNIGHFRKPCNRILPIRCSTAASPSSVSIRSKAVHFDLKTYWTSLMVQINQKLDEAIPVQFPQKIYEAMRYSSLAKGAKRAPPVMCISACELFGGSRLAAFPTACALEMVHAASLIHDDLPCMDDSSSRRGQPSNHTIYGVDMAILAGDALFPLGFQHIVSHTPTDLVPEPRLLRVIAEMARSVGSTGMAAGQFLDLEGGPNAVGFIQDKKFGEMGECSAVCGGLLAGAKDDEIERLRRYGRAVGVLYAVVDDILEERLKPEGDKDRKNKGKSYVGVYGVEKATEMAEELRAKAMEELDGFEKYGDQVLPLYSFVNYAIDRSFNVDDASG 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04640 341 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 10 332 - -
Vivi5g04640 341 FunFam Geranylgeranyl diphosphate synthase 46 334 - -
Vivi5g04640 341 SFLD Isoprenoid Synthase Type I 77 319 - -
Vivi5g04640 341 SUPERFAMILY Terpenoid synthases 50 313 IPR008949 -
Vivi5g04640 341 ProSitePatterns Polyprenyl synthases signature 1. 126 142 IPR033749 -
Vivi5g04640 341 Gene3D Farnesyl Diphosphate Synthase 46 341 IPR008949 -
Vivi5g04640 341 CDD Trans_IPPS_HT 73 332 IPR000092 GO:0008299
Vivi5g04640 341 Pfam Polyprenyl synthetase 75 295 IPR000092 GO:0008299
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04640 Vivi-Chr5 145024022 145026306 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04640 K13789 - gmx:100788186 568.926
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04640 5 145024022 145026306 Vivi5g04640 5 145024022 145026306 ECH