Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04462 ATGGAGCTACAAAAAATCATATCCATATTATTACCTCACTCTGAACCTTTTTGCAAAATAAGTAACATATCAGAAACATCTAATGATTTTTGCTACCATACTGAGTCATTTAAGAAGCTGGTGGAAATGGACTTGCCTTGTAATGAATCTGTCGAAGAAAAACTGCGTTGGTTGCGGTCTCAAATCATAGGTAATGATGATGCTGAGTTTGATTCTTCGTTTGGAAGACGAAAAATTCTCTATGCTGATCACACTGCTTCTGGCCGCAGTCTTCATTACAGTGAAAATTTCATCGTCAATCATCTTCTTCCTTTCTATGGTAATACTCATACTTGCGATAGTTATGTGGGAAGCAGAACAACAAAGATGCTACACGAAGCAATGGAGTACATTAAGAAATGCTTAGGTGGTGGAGAAGATGATGCAATCATCTTCTGTGGTTCAGGAACAACTTCAGCCATCAAGAGGCTTCAAGAAGTGATGGGAATTGCAGTGCCTTCTATTTTGAGGGAGAGAATGTTGAGGTGTCTTGATGAAGAAGAAAGATGGGTGGTTTTTGTTGGACCACATGAGCATCATTCAAATTTACTTTCATGGAGGCAGAGTTTGGCTGAGGTTGTAGAGATTGGATTTGATGATAAAGGATTGCTTGACATCGAAGCTTTAAAGCTACAGCTTGAAGGTTATAAAGATTCTAATAGGCCTTTGTTGGGATCTTTCTCTGCTTGTAGTAATGTGACCGGAATATACTCGGATACGCGTGCAATTGCTAGGCTTCTTCATCAATACAATGGATTTGCATGTTTTGATTTTGCAGCAAGTGGTCCTTATGTGGAAATCAACATGAGATCAGGGGAGATTGATGGGTATGATGCTGTGTTCATCAGTCCACATAAATTTCTTGGCGGTCCTGACTCTCCCGGCGTGCTTTTGATGAACAAGGTTTTGTATAAGTTAAGATCTGCACCTCCATCCACTTGTGGAGGTGGGACTGTCACTTATGTCAATGGCTTCAATGAAAAGGACACATTATACATGGAGAACATAGAAGAGAGGGAAAATGGTGGCACACCTCCAATAATTCAGACAGTGAGAGCAGCATTAGCATTTTGGGTGAAAGAATACATTGGCTACAAAGAGATTGAAAAAAGAGAAGAACTGTATATTAACAAGGCAATTAAGAGACTTGTATCGAACCCTAACATTAAGATTTTGGGTAACTTGCACGTCAAACGACAAGCTATACTGTCATTTCTCATTTATTCAACAACCAATTCTTGCTTATCAACTGATAGAAGTTGCCAAGAACAAGAAAAGGAACTTAATCTATGGCAAGAAATGGGGAATCAAAGAGGTAAACCACTTAATGGACCTTTTGTTGCAGCATTGCTTAATGACCTTTTTGGCATTCAAGCTAGAGGTGGGTGTGCTTGTGCTGGACCTTATGGACATGAATTACTGAATATCGATAAACCACAATCACTTGCTATTAGATCAGCAGTTCAACGGGGCTATATTGGAGTAAAACCTGGTTGGGCAAGAGTTAGCTTTCCTTATTACATGAGTGAAGAGGATTTTGAGTACATTCTAAGTGCAATAGAGTTTTTAGCTTTATATGGCCAAAGGTTCTTTCCTCTATACACCTTCAATTTGAGGAATGGAAGCTGGAGAATGAAGACAAAAAAATTTGAGGCATTAAACAAGGAAGAGAATTGCAACATTTCTAATCACTTATTGGGAAACAAACTAGAGGAAGTAAACACAAATGTTGGAGTTAAACAACAAGATGTGGTTGTGAGGGGGAACCAATCTTATCTTGAAGTGGCGAAATATATTGCTAAGAGCCTCCCTAAATTCCCTCCTCAGGGTATATTGCAAGAAGACATTGATTCTGATATCCTCTACTTTAGAGTTTGA 1917 0.3891 MELQKIISILLPHSEPFCKISNISETSNDFCYHTESFKKLVEMDLPCNESVEEKLRWLRSQIIGNDDAEFDSSFGRRKILYADHTASGRSLHYSENFIVNHLLPFYGNTHTCDSYVGSRTTKMLHEAMEYIKKCLGGGEDDAIIFCGSGTTSAIKRLQEVMGIAVPSILRERMLRCLDEEERWVVFVGPHEHHSNLLSWRQSLAEVVEIGFDDKGLLDIEALKLQLEGYKDSNRPLLGSFSACSNVTGIYSDTRAIARLLHQYNGFACFDFAASGPYVEINMRSGEIDGYDAVFISPHKFLGGPDSPGVLLMNKVLYKLRSAPPSTCGGGTVTYVNGFNEKDTLYMENIEERENGGTPPIIQTVRAALAFWVKEYIGYKEIEKREELYINKAIKRLVSNPNIKILGNLHVKRQAILSFLIYSTTNSCLSTDRSCQEQEKELNLWQEMGNQRGKPLNGPFVAALLNDLFGIQARGGCACAGPYGHELLNIDKPQSLAIRSAVQRGYIGVKPGWARVSFPYYMSEEDFEYILSAIEFLALYGQRFFPLYTFNLRNGSWRMKTKKFEALNKEENCNISNHLLGNKLEEVNTNVGVKQQDVVVRGNQSYLEVAKYIAKSLPKFPPQGILQEDIDSDILYFRV 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04462 638 SUPERFAMILY PLP-dependent transferases 74 534 IPR015424 -
Vivi5g04462 638 Gene3D Aspartate Aminotransferase, domain 1 349 539 IPR015422 GO:0003824
Vivi5g04462 638 Gene3D - 98 333 IPR015421 GO:0003824
Vivi5g04462 638 PANTHER CYSTEINE DESULFURASE 49 542 - -
Vivi5g04462 638 Pfam Aminotransferase class-V 101 420 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04462 Vivi-Chr5 142522292 142524984 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04462 - - lja:Lj4g3v2742940.1 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04462 5 142522292 142524984 Vivi5g04462 5 142522292 142524984 ECH