Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04460 ATGTTGACAACGGTAGAGCATACTTGGTCATCAATGAAACCAATATTGGCTCAGCTATGCATTTCTCCCAACAAACGCAAGGCCAACAAGAAAGTCAACAACGTTTCATCCGATGAAACATGTCTCAATAACATTCACTCAGATTCTTTTCAGCACTTGTTCGAGCTTGGTCTTCCATGTAACGAGTCTCTGGAAGAAAAACTCTCTTGGATTCAATCACAAATCATAGGTAATGATGCAGAGTTTGATTCTCCGTTTGGAAGAAGGAAACTTGTCTATGCAGATCACACAGCTTCTGGTCGCAGTCTTCATTGCATTGAAAACTTCATCACCAAACATGTTCTTCCTTTCTACGGTAATACTCATACTTCTGAGAGTCACGTTGGAAGTAGAACAACAAAAATGCTACATGAAGCAACCGAATATATTAAGAAATGTTTAGGAGGAGGAGAAGACGAAGCACTCATTTTATGCGGTTCGGGCGCAACCGCGGCGATCAAGAGGCTACAAGAAGTGATGGGAATTGCAGTGCCTTCTATTTTGAGGGAGAGGATGTTGAGGTGTCTTCATGAAGAAGAAAGATGGGTGGTTTTTGTAGGACCTTATGAGCATCATTCAAATTTACTTTCATGGAGGCAAAGTTTGGCTGAGGTTGTAGAGATTGGACTTGATGATAAAGGATTGCTTGACATGGAAGCTTTAAAGATGCAACTTGAAGGTTATAAAGATTCTAATAGACCATTGTTGGGATCTTTCTCTGCTTGTAGTAATGTTACCGGAATTTACTCGGATACGCGCGCGATTGCTAGGCTTCTTCATCAATACAACGGATTTGCATGTTTTGATTTTGCAGCAAGTGGTCCTTATGAGGAGATCAAGATGAGATCAGGGAAGGTTGATGGTTATGATGCTGTGTTTATCAGCCCACATAAGTTTCTAGGTGGTCCTGACTCTCCTGGAGTGCTTTTGATGAACAAAGCTTTGTATCATTTAAAATCTTCACCCCCATCTACTTGTGGAGGTGGAACTGTCAATTACGTCAATGGATTCAATGAAAAGGATACATTATACTTGGAGGATATAGAGGAAAGGGAAAACGGAGGCACACCACCAATAATCCAAACAATGAGAGCAGCATTAGCATTTTGTGTGAAAGAATTCATCAACTACAATGAGATTGAAAAGCTTGAACAATTCTACATCAACAAAGCACTTAAAAGACTCATGTCCAACCAAAACATCCATATTCTAGGAAACTTGAACACCAAAAGACAAGCCATATTGTCATTTGTCATTTACTCTACCACCAATTCTAAGAACAAACGAGGTAAGATACTCAATGGCTCTTTCGTCGCAACATTGTTAAACGATCTCTTCGGTATTCAATCTCGAGGTGGATGTGCTTGTGCTGGACCTTATGGTCACAATTTGCTCAACATCAATCAATCTCAATCACTCGCGGTTAGATCGACGATTCAAGAGGGTTATGTCGGGGTGAAACCGGGTTGGACTAGAGTTAGTTTTCCTTATTACATGAAGGAAGAGGACTTTGAGTTCATTTTGACTGCCATAGAGTTTTTATCTATCTATGGACAAAGGTTTCTTCCACTATACAAGTTTGATTTGAAGAATGGAAGCTGGAGAATAAGGAAACATAAACTTGAGACTTTGATCAAGGAGAGTAAATGTTGTTGTAAAGAAAGTAAAGAGACAACAATGAGTGACTATGTTAAAGTAGGCAGTGAGCATAATGTTGGAAGTAAACAAATTGGAGTGTTGAGAAGGAAATCATACATAGCTGCTAAATGTATTGCTAGGCGACTCCCCAAATTTCATTCTCAAAGCATGATGCATCTTGATGTAGATGTAGATGTAGATCCTAGTGTCCTCCATTTTATAATTTAA 1905 0.3942 MLTTVEHTWSSMKPILAQLCISPNKRKANKKVNNVSSDETCLNNIHSDSFQHLFELGLPCNESLEEKLSWIQSQIIGNDAEFDSPFGRRKLVYADHTASGRSLHCIENFITKHVLPFYGNTHTSESHVGSRTTKMLHEATEYIKKCLGGGEDEALILCGSGATAAIKRLQEVMGIAVPSILRERMLRCLHEEERWVVFVGPYEHHSNLLSWRQSLAEVVEIGLDDKGLLDMEALKMQLEGYKDSNRPLLGSFSACSNVTGIYSDTRAIARLLHQYNGFACFDFAASGPYEEIKMRSGKVDGYDAVFISPHKFLGGPDSPGVLLMNKALYHLKSSPPSTCGGGTVNYVNGFNEKDTLYLEDIEERENGGTPPIIQTMRAALAFCVKEFINYNEIEKLEQFYINKALKRLMSNQNIHILGNLNTKRQAILSFVIYSTTNSKNKRGKILNGSFVATLLNDLFGIQSRGGCACAGPYGHNLLNINQSQSLAVRSTIQEGYVGVKPGWTRVSFPYYMKEEDFEFILTAIEFLSIYGQRFLPLYKFDLKNGSWRIRKHKLETLIKESKCCCKESKETTMSDYVKVGSEHNVGSKQIGVLRRKSYIAAKCIARRLPKFHSQSMMHLDVDVDVDPSVLHFII 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04460 634 Gene3D Aspartate Aminotransferase, domain 1 370 530 IPR015422 GO:0003824
Vivi5g04460 634 Pfam Aminotransferase class-V 92 517 IPR000192 -
Vivi5g04460 634 Gene3D - 107 346 IPR015421 GO:0003824
Vivi5g04460 634 PANTHER CYSTEINE DESULFURASE 62 533 - -
Vivi5g04460 634 SUPERFAMILY PLP-dependent transferases 85 525 IPR015424 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04460 Vivi-Chr5 142492617 142496122 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04460 - - gmx:100776921 895.575
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04460 5 142492617 142496122 Vivi5g04460 5 142492617 142496122 ECH