Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04413 ATGGTATTGTCTCATGGGAATGCACACTCCCACACTGCAAAGATGGAACAGATAATCACTGAATTTTTCGCGAAAACTCTTCACATCATACTTGAATCAAGGGCACTTTCCGCGTCTTCGCGTAATTCCTATGGTGGTGGTGATAGATCAGATTCATCACCGTGTTCGTCTTCTTCGCCCTCGCCTAGTGTGAGACCGAGGGATAAATGGTTCAATTTGGCACTCCGGGAGTGTCCTGCGGCGTTGGTCAATATTAACAATCTTGAATGCCTTATCATTGATGTGATTTTGGTTCATAGGTCTCTAGATTTCGACCCCATGACCCCAAAAAGGGTTCTTCCTAGGAGTTCTTCACGGAAAGAAAGATATCCACTTTGCTACATTAGGGAAGAAGTAGGGGTTGATGCAAAGAGTGAAAAGATTGTAGAGAGGTGGGTTGTGCAATATGAGAATAGGAAGATAAAGGATTCTAATTCGGGAACTAGGAGGTGGAGCAATTTTTTGTTGCAAAACTTGTATAAGAAATTAACGAACATGTTGAGATCTTTGTATGCCAAAGTTAGACTTTTACCTGCCTATAAAATTTTCAAAGATCTTAGTTCGTCTGCAGAGATTCGTCCCTTTACCCTTGCTCATTGCGTGTCTTCTTTTGTTGAGCCGTTCACACTAAAAGAAGAGTCTGAAATGATGAAATATAGGTTTACTCCTGTGGATACTTCTTCTGGTAGGCTCTGCCTTGAAGTGATGTATTGCCCCTTGACCTCAAATTTGATCGGTTATCCGTTATCTTTGTTCTCTCGAGTTATTCCTGACTATGTTGGAAGCCCGTTGGCAGATCCATCAAGGAAGCTCCCATTGTTTCCTTTGGAAGGAGTTCCATGTCATGGCTCTCCATCGGCAAGGCGACATAGTTCCAATTTTGATGATTGTAAAGCCTCGTCTACTTCCATCACTGATCCATCTTTGCCAAAATCACACGTATCCGTGTCTAATTCAAGTTCATGTATTTTTCCACCTGGAAGTTTGGCTCCTTCAATTCAGAAAAATGGTGCAAGTATTGATGATGGTTTTAATCCCTCTCCATCACCTTCAACCTACTATACTTGTTCTTCATCATCCACTACACTTTTAGGATCTGAAGCTGTTAATTCCTCCGGATACACCGATAGAAGTACAAATGTGATGCAAAGTGGAGCAACTGCTGAGAAGGTATTTTCTCTAGGAAAAGTAGAAAGTTTGCGGCGTAGTTTGATTTCCAGTAGGTCTTACCGGAATGATTTTGATGGTACTGATATTAGTTGTCCATTTGACGTGGATTATGATGATATGAAAGGTACAGGAAGCAGAAAATCAAATGATGCTGCTGTCGGTACGCTTGTAGATATGCTAAAGAAAGCACGACCTCTCCATCAAGATCTTTACTCTTCAAAACACCACTCTCTACATTGTGTAGGGATGCGCCGACCAGCAATTCCCACCTTGAGGGCCAATCTCACAACTAAACCTAATGACGTATCTATAGGAAGTAGGAAAACAACACGTGATGCATTGGAAGAGTACGAAGATTACTTGGAGATCAAAAAATGGTTGGTTAGTAAGCCACAAATATAG 1611 0.4153 MVLSHGNAHSHTAKMEQIITEFFAKTLHIILESRALSASSRNSYGGGDRSDSSPCSSSSPSPSVRPRDKWFNLALRECPAALVNINNLECLIIDVILVHRSLDFDPMTPKRVLPRSSSRKERYPLCYIREEVGVDAKSEKIVERWVVQYENRKIKDSNSGTRRWSNFLLQNLYKKLTNMLRSLYAKVRLLPAYKIFKDLSSSAEIRPFTLAHCVSSFVEPFTLKEESEMMKYRFTPVDTSSGRLCLEVMYCPLTSNLIGYPLSLFSRVIPDYVGSPLADPSRKLPLFPLEGVPCHGSPSARRHSSNFDDCKASSTSITDPSLPKSHVSVSNSSSCIFPPGSLAPSIQKNGASIDDGFNPSPSPSTYYTCSSSSTTLLGSEAVNSSGYTDRSTNVMQSGATAEKVFSLGKVESLRRSLISSRSYRNDFDGTDISCPFDVDYDDMKGTGSRKSNDAAVGTLVDMLKKARPLHQDLYSSKHHSLHCVGMRRPAIPTLRANLTTKPNDVSIGSRKTTRDALEEYEDYLEIKKWLVSKPQI 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04413 536 MobiDBLite consensus disorder prediction 298 325 - -
Vivi5g04413 536 MobiDBLite consensus disorder prediction 39 65 - -
Vivi5g04413 536 PANTHER UNCHARACTERIZED 389 530 IPR040182 GO:0000045
Vivi5g04413 536 Pfam Autophagy-related protein 13 19 250 IPR018731 GO:0006914|GO:1990316
Vivi5g04413 536 Gene3D HORMA domain 11 255 IPR036570 -
Vivi5g04413 536 MobiDBLite consensus disorder prediction 309 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04413 Vivi-Chr5 141841676 141844248 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04413 K08331 - gmx:100798585 494.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04413 5 141841676 141844248 Vivi5g04413 5 141841676 141844248 ECH