Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04389 ATGGGTGTGTCAAAGGAACAAGTGGAATCATCTTTGAACTCCAAACTTAACCCTTCCCATCTTGAAGTAATCGATATATCTGGAGGGTGTGGTGCAAGTTTTTCTGTTGAGATCGTGTCGGAACAATTTGAAGGCAAAAGGCTACTTGAAAGGCATAGAATGGTGAATGCTGCATTAGAAGAGGAAATGAAAGAGATTCATGCTCTCTCTGTAAAGAAAGCTGTAACTCCAGAGCAGTGGAAAAAACAGCAAGAATCCAACCAATCAAACCCTGCTGCCTAG 282 0.4184 MGVSKEQVESSLNSKLNPSHLEVIDISGGCGASFSVEIVSEQFEGKRLLERHRMVNAALEEEMKEIHALSVKKAVTPEQWKKQQESNQSNPAA 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04389 93 PIRSF BolA 1 93 IPR002634 -
Vivi5g04389 93 Gene3D - 2 91 IPR036065 -
Vivi5g04389 93 FunFam Protein BOLA2 2 92 - -
Vivi5g04389 93 Coils Coil 49 69 - -
Vivi5g04389 93 SUPERFAMILY BolA-like 2 84 IPR036065 -
Vivi5g04389 93 Pfam BolA-like protein 12 79 IPR002634 -
Vivi5g04389 93 PANTHER BOLA-LIKE PROTEIN-RELATED 1 85 IPR045115 GO:0051537|GO:0097428
Vivi5g04389 93 MobiDBLite consensus disorder prediction 74 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04389 Vivi-Chr5 141498152 141506201 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04389 - K22075 gmx:100778528 171.014
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04389 5 141498152 141506201 Vivi5g04389 5 141498152 141506201 ECH