Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04331 ATGGCTGTGGAGTACCATTGTTGCGAACCCGGATTCTTCATCCATATCGTGATAATCATACTGTTGGTGGTGTTCGCCGGATTAATGTCCGGCCTCACCTTGGGACTCATGTCTTTGAGTCTCGTTGATCTTGAAGTTCTAGCTAAGTCCGGTACTCCTCGCGATCGTAAACATGCCGAGAAGATATTGCCAGTTGTGAGAAATCAGCATTTGTTGCTTTGTACTTTGCTGATTTGCAATGCTGCCGCCATGGAGGCACTTCCAATTTTTCTTGATAGTCTTGTTACTGCTTGGGGTGCTATCCTTATATCGGTCACGTTGATTCTTCTCTTTGGTGAGATTATACCCCAATCGATTTGTTCTCGATATGGGTTAGCTATTGGTGCATCAGTGACTCCTTTTGTTCGCGTGCTTGTATGGATATGTTACCCAGTTTCTTTTCCAATTAGCAAGTTGTTGGACTATTTGTTGGGTCATCGACATGAAGCCCTTTTCCGCAGAGCTGAGTTGAAAACGCTCGTAGATTTGCATGGTAATGAGGCTGGAAAAGGTGGGGAACTCACTCATGATGAAACAACAATAATTGCTGGGGCACTTGAACTTAGTGGCAAGACAGCCAGTGATGCCATGACTCCTATATCTGAAACATTTGCCATTGATATTAATTCGAAGCTTGATAGGCGGCTGATGACTGAAATATTGGAGAAAGGGCATAGCAGAGTCCCAGTCTATTATGAGCATCCCACAAACATTATTGGACTTATACTGATCAAGAATTTATTTACAATTCATCCAGAAGATGAAGAACCTGTGAAGAGTGTAACCATACGCAGGATTCCAAGGGTTCCAGAAAGTATACCACTTTATGACATTTTGAATGAGTTTCAGAAGGGCCATAGTCACATGGCCGTTGTTGTAAGACAGTCTAACAAGAACAAGCAACCATCTTCCCCAAATAATGCAAATGGTAAGAACATGCAACCATCTCCCCAAAATAATGCAAATGATTCGGTGAGAGAAGTGAAGGTGGATATTGAAGGCGAAAAGCCTCCCCAAGAGAAAGTCTTGAAACCCAAGATACCAATCCAAAAGTGGAAAAGCTATCCAAATTCAAACAGGTCAAATAGGGGTGGTTCGCGGGGCAGAAAATGGACAAAAAATATGTACTCAGATATTTTAGAGATAGATGGTGGTCCCCTTCCAAATATCTCTGAAGAAGAAGAAGTTGTTGGAATAATTACAATGGAAGATGTCATTGAAGAACTTTTACAGGAGGAGATCTTTGATGAGACGGATCATCATTTTGAAGACTCATGA 1317 0.4191 MAVEYHCCEPGFFIHIVIIILLVVFAGLMSGLTLGLMSLSLVDLEVLAKSGTPRDRKHAEKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVTAWGAILISVTLILLFGEIIPQSICSRYGLAIGASVTPFVRVLVWICYPVSFPISKLLDYLLGHRHEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSGKTASDAMTPISETFAIDINSKLDRRLMTEILEKGHSRVPVYYEHPTNIIGLILIKNLFTIHPEDEEPVKSVTIRRIPRVPESIPLYDILNEFQKGHSHMAVVVRQSNKNKQPSSPNNANGKNMQPSPQNNANDSVREVKVDIEGEKPPQEKVLKPKIPIQKWKSYPNSNRSNRGGSRGRKWTKNMYSDILEIDGGPLPNISEEEEVVGIITMEDVIEELLQEEIFDETDHHFEDS 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04331 438 Gene3D - 191 323 IPR046342 -
Vivi5g04331 438 PANTHER METAL TRANSPORTER CNNM 3 435 IPR045095 GO:0010960
Vivi5g04331 438 MobiDBLite consensus disorder prediction 310 338 - -
Vivi5g04331 438 Pfam Cyclin M transmembrane N-terminal domain 18 190 IPR002550 -
Vivi5g04331 438 MobiDBLite consensus disorder prediction 339 355 - -
Vivi5g04331 438 Gene3D - 396 430 IPR046342 -
Vivi5g04331 438 MobiDBLite consensus disorder prediction 310 383 - -
Vivi5g04331 438 CDD CBS_pair_CorC_HlyC_assoc 205 306 IPR044751 -
Vivi5g04331 438 FunFam DUF21 domain-containing protein 189 324 - -
Vivi5g04331 438 SUPERFAMILY CBS-domain pair 194 424 IPR046342 -
Vivi5g04331 438 ProSiteProfiles CNNM transmembrane domain profile. 8 191 IPR002550 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04331 Vivi-Chr5 140784464 140789940 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04331 K16302 - gmx:100801937 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04331 5 140784464 140789940 Vivi5g04331 5 140784464 140789940 ECH
Vivi5g04331 5 140784464 140789940 Vivi5g04331 5 140784464 140789940 PCT