Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04234 ATGGCCGTAGCTGAACCCAAGCCTCACTCCGAACCTAAGGTCTGGAATTTCTTCAAGCTTCCTTTTCGCAATTCCAGCACCACTTCTTCCTCCGGAACGACGTCGTCTTCTCCCAACCTTCATCATCCTCTTCATCATCAACATCACCATAACCCTAACAGTAACACTCACAATCCTCCTCCGCTTGAAGGCTCCAGTTCTCAATCTTCCAATTCTGTTTCCTCCGTTGCCAGATCGCTTCTCCCAACACGACGTCGTCTCAAGCTTGATCCTTCGAACAAGCTTTACTTCCCTTATGAGCCAGGAAAACAGGTTAGGAGTGCTGTCAGAATTAAGAACACCAGTAAATCTAATGTAGCTTTCAAGTTTCAAACAACTGCACCGAAAAGTTGTTTCATGCGTCCGCCTGGGGCTATCCTTGCACCTGGCGAGAGTATCATAGCAACGGTGTTCAAGTTTGTAGAGCAACCAGAAAATAATGAAAAGCCCGAAAAAAGTGGACTCAAATTTAAAATCATGAGTTTGAAAGTCAAAGGTTCAATTGATTACGTCCCTGAGCTGTTTGATGAGCAGAAGGACCAGGTTGCAGTTGAGCAAATTTTACGTGTTGTTTTTCTAGATCCAGAGCGCCCTAGTCCTATTTTGGAAAAACTGAAGCGACAGCTGGCTGATGCCGATGCTGCTCTTGAAGCACGGAAGAAACCTGCAGAAGATGTGGGTCCTAAAATAATTGGAGAAGGGCTTGTCATAGACGAATGGAAAGAGAGGAGGGAAAGATACCTTGCTAAGCAGCAGGGCGATGTGGTTGTAGATTCTGTATAG 822 0.455 MAVAEPKPHSEPKVWNFFKLPFRNSSTTSSSGTTSSSPNLHHPLHHQHHHNPNSNTHNPPPLEGSSSQSSNSVSSVARSLLPTRRRLKLDPSNKLYFPYEPGKQVRSAVRIKNTSKSNVAFKFQTTAPKSCFMRPPGAILAPGESIIATVFKFVEQPENNEKPEKSGLKFKIMSLKVKGSIDYVPELFDEQKDQVAVEQILRVVFLDPERPSPILEKLKRQLADADAALEARKKPAEDVGPKIIGEGLVIDEWKERRERYLAKQQGDVVVDSV 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04234 273 MobiDBLite consensus disorder prediction 53 79 - -
Vivi5g04234 273 MobiDBLite consensus disorder prediction 25 41 - -
Vivi5g04234 273 ProSiteProfiles Major sperm protein (MSP) domain profile. 86 206 IPR000535 -
Vivi5g04234 273 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 85 264 IPR016763 GO:0005789
Vivi5g04234 273 Pfam MSP (Major sperm protein) domain 87 196 IPR000535 -
Vivi5g04234 273 SUPERFAMILY PapD-like 75 216 IPR008962 -
Vivi5g04234 273 Gene3D Immunoglobulins 82 210 IPR013783 -
Vivi5g04234 273 MobiDBLite consensus disorder prediction 25 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04234 Vivi-Chr5 139259077 139262883 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04234 - - tpra:123916616 451.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04234 5 139259077 139262883 Vivi5g04234 5 139259077 139262883 ECH