Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04175 ATGTCTTTATATTGTTCCATGTTAGGTGCTAACATACCACATATATTAAAACTTGGAAAGAGAATTGACTACTTCGCATTCAGCCATTTAGAACCAAAAGCTAGTTCATGCTTCTTGTCCCTCCAAAATAAAAAGAATCTCTCAAGCCACGTCGGTTTTGTGTCCAAATTCGAACAAAATTTTTCTTCTCCTTTGATGAAGGAGGACAAACAAATGGTTGATCTTGTCTCGCAGTCGGAGGAATACTCCGAAGAATTGGACGTTGCTGTCAGAGCTGTGCAGATGGCTTGTTCTCTAAGTAAGAAAGTGCAACACACTTTGATTTCCAAGCCTAGTAGCAATGATCAGGTACAATCTAAGGGTTGTAGTTCTTCGGTCGCAGTTGCAGGTTGGTGTGTCAAAGCAATTTTCAGCTGTATACTGTCTGCATATTTAGGAGGTGAAAACATCTCGATTCTAGCTGAAGACGATGATGTTCGTACTCTCTCGAACTCTAATGCATCTGAGTTGCTAGAACCTGTGGTAAAAATTGTGAATGAATGTCTATCGGAAGCACCTCAATTTGGATTTGAAGCAGTAAAACTAAAATCACCTCTTGGAACTTCAGAGGTTCTTGAAATCATTAGTCGTTGTGCCTCGATTCGGGATCCTTCTGGAAGATTTTGGACATTGGGATTTGTAAGCAGTGATCAATATGCGGTCGGTTTATCGCTTATAGAGGATGGAGAAGTGGTGGTTGGTGTTCTTGGGTCTCCTAACTACCCTATGAGAAAGGATTGGTTTAGTTATCAGAAAAGCTATCATAGGATTATATCCAAGTTGATTCCTTTAACAACTGAAACATGGAATGAAGGTTGTGTTGTTTATGCTAAGAAGGGTAGTGGCAAGGCTTGGATCCAACCATTGATCCATCATGTCAATGAGAAGTTTGTGTGGCCAAACCATGCAAAACAGGTTTCTGTCTCTTCTGTTGACAACCTCGGATTGGCCACTTTATGTCAATCAGTTGAGAAGGTTGATTCAAACCACTCTTTTATTGATGGACTGGCTCATAGTGTTGGTCTCAGTAACAAGCCATTAAGAGTTTACAGCATGGCAAAATATGTAGCAATAGCTTGTGGAGACGCTGAGGCCTTCATGCAATTTGCAAGAAGTGGTTACAAGGAGAAAATATGGGATCATGCTGCTGGTGCTATCATAATACAAGAAGCAGGAGGCACAGTAACAGATATTAGGGGTCGTTTGTTGGACTTCTCCAAAGGCTCATATGTGGAAGGGATCGATCGTGGTATAGTTGCTTGTGCTGGATCCAAATTACACGAAAAGATCATAGATGCTGTTGATGCTAGTTGGGCCTCTTCTGGTCTTTGA 1371 0.4114 MSLYCSMLGANIPHILKLGKRIDYFAFSHLEPKASSCFLSLQNKKNLSSHVGFVSKFEQNFSSPLMKEDKQMVDLVSQSEEYSEELDVAVRAVQMACSLSKKVQHTLISKPSSNDQVQSKGCSSSVAVAGWCVKAIFSCILSAYLGGENISILAEDDDVRTLSNSNASELLEPVVKIVNECLSEAPQFGFEAVKLKSPLGTSEVLEIISRCASIRDPSGRFWTLGFVSSDQYAVGLSLIEDGEVVVGVLGSPNYPMRKDWFSYQKSYHRIISKLIPLTTETWNEGCVVYAKKGSGKAWIQPLIHHVNEKFVWPNHAKQVSVSSVDNLGLATLCQSVEKVDSNHSFIDGLAHSVGLSNKPLRVYSMAKYVAIACGDAEAFMQFARSGYKEKIWDHAAGAIIIQEAGGTVTDIRGRLLDFSKGSYVEGIDRGIVACAGSKLHEKIIDAVDASWASSGL 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04175 456 Gene3D - 80 309 - -
Vivi5g04175 456 ProSitePatterns Inositol monophosphatase family signature 2. 392 406 IPR020550 GO:0046854
Vivi5g04175 456 Gene3D - 320 450 - -
Vivi5g04175 456 NCBIfam 3'(2'),5'-bisphosphate nucleotidase 82 454 IPR006239 GO:0006790|GO:0008441
Vivi5g04175 456 SUPERFAMILY Carbohydrate phosphatase 82 448 - -
Vivi5g04175 456 FunFam PAP-specific phosphatase HAL2-like 320 453 - -
Vivi5g04175 456 Pfam Inositol monophosphatase family 158 451 IPR000760 -
Vivi5g04175 456 PANTHER PHOSPHATASE 68 453 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04175 Vivi-Chr5 138324907 138327505 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04175 K01082 - gmx:100306018 586.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04175 5 138324907 138327505 Vivi5g04175 5 138324907 138327505 ECH
Vivi5g04175 5 138324907 138327505 Vivi5g04175 5 138324907 138327505 PCT