Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04090 ATGGATTCCAACAACAACCTCAAATCTCCAAGAAACGGTTCTTCTCTTCCTTCACCACGCTATAGCCAGAGCTCTAGCAGCAGCAGCAACAACAGTAACATCATCAACAATGGAACAGTTTTGAATCTTCCAAAACCTGTCACCAGATCCGAACCGGGTAACCCATACCCGACAACATTCGTTCAAGCTGACCCATCTTCGTTCAAACAAGTTGTTCAAATGTTAACCGGATCCGCTGAAACCGCAAAACAAACCTCTTCAAATTCCACCACCACCACCACCAACAACAACAACAACGTAAGAAACCATATTCCACCTATCAAAACCATACCCAAAAAACCAAACCAATCCGGTTTCAAACTCTACGAACGAAGAAACTCTCTCAAGAATCTCAAACTCAACCCTCTTCTACCTGTTTTCTCTTCAAACCCTTCTGGTTTCTCTCCTCGTAACGCTGATGTTCTGTCACCAAGTATCCTCGATTTCCCCGCACTTGTTCTCAGTCCTGTCACCCCTCTGATACCCGACCCGTTTAACAGAAACAACGTCCCCGGTGGTGGTGGAAGCGGTTACCGATGCGGGAATGGGAGTCAGAGTCCAAGTCCGAGTCCGAGTTCGAAACCAGTTTTGAACACTGAAGCTGAAGAAAAAGCTATCAGAGAGAAAGGGTTTTTCTTGCACCCTTCACCGGGAAACACTCCAAGAGACTCTGAACTTCGTTTGCTTCCTCTCTTTCCAACTACTTCTCCAAGAGCTTCGGGTCCTTCTTCTTCTTCTACTTCCAGTACTTGA 792 0.4609 MDSNNNLKSPRNGSSLPSPRYSQSSSSSSNNSNIINNGTVLNLPKPVTRSEPGNPYPTTFVQADPSSFKQVVQMLTGSAETAKQTSSNSTTTTTNNNNNVRNHIPPIKTIPKKPNQSGFKLYERRNSLKNLKLNPLLPVFSSNPSGFSPRNADVLSPSILDFPALVLSPVTPLIPDPFNRNNVPGGGGSGYRCGNGSQSPSPSPSSKPVLNTEAEEKAIREKGFFLHPSPGNTPRDSELRLLPLFPTTSPRASGPSSSSTSST 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04090 263 PANTHER VQ MOTIF-CONTAINING PROTEIN 11-LIKE 24 253 IPR039611 -
Vivi5g04090 263 Pfam VQ motif 55 81 IPR008889 -
Vivi5g04090 263 MobiDBLite consensus disorder prediction 175 263 - -
Vivi5g04090 263 MobiDBLite consensus disorder prediction 76 104 - -
Vivi5g04090 263 MobiDBLite consensus disorder prediction 1 44 - -
Vivi5g04090 263 MobiDBLite consensus disorder prediction 249 263 - -
Vivi5g04090 263 MobiDBLite consensus disorder prediction 76 117 - -
Vivi5g04090 263 MobiDBLite consensus disorder prediction 1 62 - -
Vivi5g04090 263 MobiDBLite consensus disorder prediction 192 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04090 Vivi-Chr5 137188969 137190039 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04090 - - csav:115697462 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04090 5 137188969 137190039 Vivi5g04090 5 137188969 137190039 ECH
Vivi5g04090 5 137188969 137190039 Vivi5g04090 5 137188969 137190039 PCT