Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04048 ATGGATGTTAAAGTGCCACACCTTAAAGATGAACAAAACCTACCACTTCTCCACAACATGGATGTTATAGAACCACAAAAGACCCTTATTCATAGAGCCATAAACCAAACATGTAAAAGCACAGCTCATTTATCCAATCTTCTACCAACAGGCACTGTCCTTTCATTCCAAATCCTATCACCAATATTCACAAATCAAGGTAAATGTGAAGATGAACCAGTTACTAAGTTAATCACTTTATCCCTTTTATCCCTTTGTGCTGCATCATGTTTTCTACTATGCTTCACTGATAGTTTCAGAGACAACAAAGGAAACATATGTTACGGATTTGCCACATGTAAAGGCTTGTGGATCATTGATGGTTCAGCAACACTTCCGCATGAACTCGATGCACAATATCAACTAAGGTTCATTGATTTCATGCATGCAGTTATGTCAGTCTTGGTTTTTGCAGCTATTGCATTGTTTGATCAGAATGTGGTTAAGTGTTTCTTTCCATCACCTTCACATGAGATGCGTCGAATCCTTACAGCATTGCCGGTCGGAATCGGTGTTTTCTGTAGCATGATGTTTGTTGCATTTCCTACACAGAGACATGGAATTGGTTTCCCAGTTTCAACAAATTAA 627 0.386 MDVKVPHLKDEQNLPLLHNMDVIEPQKTLIHRAINQTCKSTAHLSNLLPTGTVLSFQILSPIFTNQGKCEDEPVTKLITLSLLSLCAASCFLLCFTDSFRDNKGNICYGFATCKGLWIIDGSATLPHELDAQYQLRFIDFMHAVMSVLVFAAIALFDQNVVKCFFPSPSHEMRRILTALPVGIGVFCSMMFVAFPTQRHGIGFPVSTN 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04048 208 Pfam Protein of unknown function (DUF679) 39 203 IPR007770 -
Vivi5g04048 208 PANTHER PROTEIN DMP3 26 204 IPR007770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04048 Vivi-Chr5 136532919 136533871 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04048 - - pvu:PHAVU_002G232400g 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04048 5 136532919 136533871 Vivi5g04048 5 136532919 136533871 ECH
Vivi5g03350 5 124554293 124554901 Vivi5g04048 5 136532919 136533871 ECH
Vivi5g04048 5 136532919 136533871 Vivi5g03350 5 124554293 124554901 PCT