Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g04021 ATGGGAAAAAGGAAGGCGAAAACAAAACCTCCTCCAAAGAAACGAATGGATAAGCTTGACACCGTCTTTAGCTGTCCTTTCTGCAATCACGGTTCCAGTGTTGAGTGTCGCATTGATATGAAGAACTTGATAGGGGAAGCTTCTTGCGGGATATGTCAGGAGAGCTTTAGCACTACCATCACAGCTTTATCTGAGGCAATAGACATATACAGTGAATGGATTGATGAATGTGAACGGGTGAACACTGTTGACGATGACGGTACTTAG 267 0.4382 MGKRKAKTKPPPKKRMDKLDTVFSCPFCNHGSSVECRIDMKNLIGEASCGICQESFSTTITALSEAIDIYSEWIDECERVNTVDDDGT 88
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g04021 88 Gene3D - 16 82 IPR038567 -
Vivi5g04021 88 PANTHER UNCHARACTERIZED 1 85 IPR007808 -
Vivi5g04021 88 FunFam Transcription elongation factor 1 homolog 15 82 - -
Vivi5g04021 88 SUPERFAMILY Zinc beta-ribbon 1 81 - -
Vivi5g04021 88 Pfam Transcription elongation factor Elf1 like 2 78 IPR007808 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g04021 Vivi-Chr5 136129124 136131186 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g04021 K25829 - qsa:O6P43_012703 171.785
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g04021 5 136129124 136131186 Vivi5g04021 5 136129124 136131186 ECH