Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03810 ATGGGGAAAAGGCATGTTGCGGACCCTCCGAACCTGAAGAAATACGGCGTTCCTTTATACTCCGTTGCTTGGGTACCCCGCAACACTCTCAAATCGATCCAAAATGTAACCGCCGACGATTCCCCCGACGCCGATTCTAAATCTCCGCCGGAGACATCTCCACTTGACGATGAGAACTACATCGTGGTCGCCGGCGGCGGTGGAGAAGGCCGAAGCGGTATCCCCAATTCTGTCATGCTCGCGCATTTCGATGTTGCATCTAATTCTCTCTCTGATCAACCGGTGAATAAGCTAGGAACTAACTCTGAGTTGCCTTATAGAATGACACTTCACCCCAATGGAGATGGAGTTATTTGTGCAATGGAAACGCCAAAGATTTGCAGGTGGTTTGACTGGGATAAGATCGAGACTGCTGAAGTACACAAGTTGGGTCTGAAGTTGTCAGAGAAAGTCCTCACCCAGTTGGATAATGTTGGCCTACAATTGGCATTGGCATTCAGCAATGATGGTACTACACTAGCTGCTGGTGGAGAGGATGGAAGTCTAAGGGTTTTCAAGTGGCCTAGCATGGAAAATATTCTCAATGAGTCTAATGCTCATTCTACTGTGAAGGACTTGCACTTCAGTTCTGATGGCAAGTTAATTGTCTCTTTGGGAGGTGGTGGCCCCTGTAAGGTTTGGGACATTTCTTCAGAAATAGTCTTGGCTACTCTAACAAATGAAAATCGTGAAAATTTTAGCTCTTGCAGATTTTCTCAAATAAATGATACAACTCAAGTCCTATATATCGCTGCCAAAACAGATAAAGGTGGAAGCATCCTGACCTGGAATACGAAAACATGGGAAAGGATTAGTTCAAAGTATATTTCACGAGATGTAATATCTGCATTCAATGTCTCACCTGATGGAAAGTTTCTGGCATGTGGAACACCAGAGGGTGAGATTATAATTGTAAATTCAACTAATATGCATATTCAGACAAAGATAAAAAAGGCTCACCTCGGCATAATCACTGCTTTAGCATTTTCCCCTGATTCAAGGGCACTGGCTTCTGTATCATGGGATTCAAGTGCAAGGGTAACAATAATTGAAGAGAAGAAAAATGGAGGGTTGAACTTGTGGATTGCTGTATTGATCATCCTACTCGCAATAGCTGCTGCTTACTTCCTAAAGGTTGAAGGAATTGAAAAGTTATGGCTTAAAGATTACTAG 1212 0.4348 MGKRHVADPPNLKKYGVPLYSVAWVPRNTLKSIQNVTADDSPDADSKSPPETSPLDDENYIVVAGGGGEGRSGIPNSVMLAHFDVASNSLSDQPVNKLGTNSELPYRMTLHPNGDGVICAMETPKICRWFDWDKIETAEVHKLGLKLSEKVLTQLDNVGLQLALAFSNDGTTLAAGGEDGSLRVFKWPSMENILNESNAHSTVKDLHFSSDGKLIVSLGGGGPCKVWDISSEIVLATLTNENRENFSSCRFSQINDTTQVLYIAAKTDKGGSILTWNTKTWERISSKYISRDVISAFNVSPDGKFLACGTPEGEIIIVNSTNMHIQTKIKKAHLGIITALAFSPDSRALASVSWDSSARVTIIEEKKNGGLNLWIAVLIILLAIAAAYFLKVEGIEKLWLKDY 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03810 403 MobiDBLite consensus disorder prediction 34 58 - -
Vivi5g03810 403 Gene3D - 52 368 IPR015943 GO:0005515
Vivi5g03810 403 SMART WD40_4 280 319 IPR001680 GO:0005515
Vivi5g03810 403 SMART WD40_4 323 362 IPR001680 GO:0005515
Vivi5g03810 403 SMART WD40_4 148 186 IPR001680 GO:0005515
Vivi5g03810 403 SMART WD40_4 190 228 IPR001680 GO:0005515
Vivi5g03810 403 FunFam SEC12-like protein 2 53 367 - -
Vivi5g03810 403 Pfam WD domain, G-beta repeat 331 360 IPR001680 GO:0005515
Vivi5g03810 403 Pfam WD domain, G-beta repeat 163 185 IPR001680 GO:0005515
Vivi5g03810 403 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 50 360 IPR011047 -
Vivi5g03810 403 ProSiteProfiles Trp-Asp (WD) repeats profile. 196 237 IPR001680 GO:0005515
Vivi5g03810 403 PANTHER PROLACTIN REGULATORY ELEMENT BINDING PROTEIN 11 391 IPR045260 GO:0005085
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03810 K14003 - gmx:100786727 567.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03810 5 132242196 132248655 Vivi5g03810 5 132242196 132248655 ECH