Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03799 ATGGCTGCTACTACTTCTCCTTCACCAAACTTGTTGATATCTTTGCACAGAAATGCTAAGAAAACGAACTATCATTCTTTATCTTTGCACAACAAACTTTGTTTCTCGTCTTTCGTGCAGTTCAATAAATCTGTAATAAGTTTGAAATCTTATGGAGCTGCTAAGTATGATGGAGTGGTGGTGGATGAAGAGTTGGACAAGATTCGGAGACTTCAGAATGGTTCGGATGTTAGAGGAGTCGCGTTGGAAGGTGAGAAAGGAAGAACGGTTGACCTTACTCCACCGGCTGTGGAGGCGATAGCAGAGAGTTTTGGCGAGTGGGTTGTCAGAGGGTTAGAGAAGGAAAAAGGATATCTAGTAGAGAATGTGAGCGTGTCTCTTGGGCGCGACCCGCGAGTTACTGGCTCGAAATTGAGCGTTGCAGTGTTTGCAGGTCTTACTCGCGGTGGTTGTATGGTGTTTGATATGGGACTAGCTACCACGCCAGCTTGTTTTATGAGTACTTTGTTGCCTCCATTCGAGTACGACGCTTCCATAATGATGACAGCGTCTCATTTGCCTTACACGCGTAATGGTCTGAAGTTTTTTACAAAGAGAGGAGGGCTGACTTCATTAGAAGTAGAAGAAATCTGTGACAACGCTGCTCGTAAATACGCAAACAGAATGGCGAAAGTGTCTTCTCTGCTTAAAGTTCTTCCTATAAAAGTTGATTTCATGAGTGCTTATTCAAAGCATCTAAGAGAAATCATCAAGGAGAGAATAAGTCATCCATTGCATTATGAAACTCCACTCAAGGGATTCCAGATAATAGTGAATGCTGGAAACGGCTCGGGAGGATTCTTCACATGGGATGTCTTAGACAAACTCGGTGCAGATACATTTGGATCTCTGCATCTTAAACCTGATGACATGTTTCCAAATCATATTCCCAACCCCGAGGACAAAATTGCCATGGCAATGACAAGATCGGCCGTGTTAGAAAACTCGGCCGATCTTGGAATAGTCTTTGATACCGATGTTGACAGAAGCGGCGTAGTTGATAACGAAGGGAACGCAATAAACGGGGACAGGCTCATTGCTCTCATGTCTGCCATTGTACTGAAAGAAAATCCAGGATCAACCATAGTGACCGATGCTCGTACGAGTATGTCGCTCACTAAGTTTATAACCGATAGAGGTGGTCACCATTGCTTGTATCGCGTTGGTTACAGAAATGTCATCGACAAAGGAGTTCATCTTAATAAAGATGGAATTGAAACACATCTTATGATTGAAACATCCGGTCACGGTGCTTTGAAAGAAAACCATTTCCTCGATGACGGAGCTTACATGGTGGTGAAAATTATAATTGAAATGGTGAGAATGAAGCTTGGTGGATCAGATGAAGGGATTGGTAGTCTTATAAAAGATCTTGAAGAGCCGTGTGAATCAATAGAATTAAGAATAAATATCATTTCTGAACCTCGAGACGCTAAAGCAAAAGGTCTCGAGGCAATTGAAACATTTCGAAGCTACATCGAGGAAGGAATGCTTAAAGGATGGGAGTTAGATTCATGTGGTGATTGTTGGGTGAGTGAAGGGTGCCTTGTTGATACAAATGACACTCCAGCTCACATTGATGCTCAAATGTACAGGGCAAGAGTATCAAATGATGAACTTGGACAACATGGTTGGATACACATGAGACAAAGTATTCACAATCCAAACATTGCTGTGAACATGCAATCATCTGTCCAAGGAGGGTGTTTGTCTATGGCAAGAGCTTTAAGAGATGATTTTCTGAAAGCAAGTGGAGTTGATACATTTCTAGACATTGCTCAAATTGATAAGTTTGTTGAAAATGGCTCATTAGCCTGA 1857 0.4216 MAATTSPSPNLLISLHRNAKKTNYHSLSLHNKLCFSSFVQFNKSVISLKSYGAAKYDGVVVDEELDKIRRLQNGSDVRGVALEGEKGRTVDLTPPAVEAIAESFGEWVVRGLEKEKGYLVENVSVSLGRDPRVTGSKLSVAVFAGLTRGGCMVFDMGLATTPACFMSTLLPPFEYDASIMMTASHLPYTRNGLKFFTKRGGLTSLEVEEICDNAARKYANRMAKVSSLLKVLPIKVDFMSAYSKHLREIIKERISHPLHYETPLKGFQIIVNAGNGSGGFFTWDVLDKLGADTFGSLHLKPDDMFPNHIPNPEDKIAMAMTRSAVLENSADLGIVFDTDVDRSGVVDNEGNAINGDRLIALMSAIVLKENPGSTIVTDARTSMSLTKFITDRGGHHCLYRVGYRNVIDKGVHLNKDGIETHLMIETSGHGALKENHFLDDGAYMVVKIIIEMVRMKLGGSDEGIGSLIKDLEEPCESIELRINIISEPRDAKAKGLEAIETFRSYIEEGMLKGWELDSCGDCWVSEGCLVDTNDTPAHIDAQMYRARVSNDELGQHGWIHMRQSIHNPNIAVNMQSSVQGGCLSMARALRDDFLKASGVDTFLDIAQIDKFVENGSLA 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03799 618 FunFam phosphomannomutase/phosphoglucomutase isoform X1 72 227 - -
Vivi5g03799 618 SUPERFAMILY Phosphoglucomutase, first 3 domains 75 250 IPR016055 GO:0005975|GO:0016868
Vivi5g03799 618 Gene3D - 268 345 - -
Vivi5g03799 618 Gene3D - 72 227 - -
Vivi5g03799 618 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 70 219 IPR005844 GO:0005975|GO:0016868
Vivi5g03799 618 SUPERFAMILY Phosphoglucomutase, first 3 domains 354 456 IPR016055 GO:0005975|GO:0016868
Vivi5g03799 618 PANTHER PHOSPHOHEXOSE MUTASE 65 611 - -
Vivi5g03799 618 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 354 454 IPR005846 GO:0005975|GO:0016868
Vivi5g03799 618 CDD PMM_PGM 71 591 - -
Vivi5g03799 618 Gene3D - 347 469 - -
Vivi5g03799 618 SUPERFAMILY Phosphoglucomutase, first 3 domains 241 352 IPR016055 GO:0005975|GO:0016868
Vivi5g03799 618 FunFam Phosphomannomutase/phosphoglucomutase isoform B 347 468 - -
Vivi5g03799 618 PRINTS Phosphoglucomutase/phosphomannomutase family signature 301 314 IPR005841 GO:0005975|GO:0016868
Vivi5g03799 618 PRINTS Phosphoglucomutase/phosphomannomutase family signature 177 191 IPR005841 GO:0005975|GO:0016868
Vivi5g03799 618 PRINTS Phosphoglucomutase/phosphomannomutase family signature 266 285 IPR005841 GO:0005975|GO:0016868
Vivi5g03799 618 PRINTS Phosphoglucomutase/phosphomannomutase family signature 330 345 IPR005841 GO:0005975|GO:0016868
Vivi5g03799 618 Pfam Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 242 350 IPR005845 GO:0005975
Vivi5g03799 618 FunFam phosphomannomutase/phosphoglucomutase isoform X1 268 345 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03799 Vivi-Chr5 131976086 131978840 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03799 - - gmx:100810397 1061.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03799 5 131976086 131978840 Vivi5g03799 5 131976086 131978840 ECH