Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03770 ATGAAGCATGGTTGCTTAATTTCCGGTTGTACTGGTTACAATAATCTCATCCCCGTTAAGGATAACTTGAAAAAGGAAGAGAACCAGTTGAAGCTCATTCCTACAAAGACAAAACAAGTCAAGTTTTTCAAAACCCTGGCTCCTCCTCTTGCGGCTGCATTCCTGCTTTTTTCTCCTATTTGCGTCCCTCCAGTTTCAAGTGCCCAAACCATAGATATCCTAAGAGGAGCCTCCTTGTTCCAACAAACGTGTATTGGATGTCACGATGCAGGTGGAAACATTATACAACCAGGATCAACTCTATTCACAAAGGATTTACAAAGAAATGGAGTTGATACAGAAGAAGAAATCCACCGCGTCACATACTATGGCAAAGGAAGAATGCCGGGATTTGGTAAAGAGTGCAAGCCTCGAGGGCAGTGTACATTTGGAGCTCGTTTGGAAGATGAAGATATCAAGATATTGGCTGAGTTTGTCAAGTTACAAGCTGATAAAGGGTGGCCAAGTATAGAAATTGAAGAAAAATGA 528 0.4167 MKHGCLISGCTGYNNLIPVKDNLKKEENQLKLIPTKTKQVKFFKTLAPPLAAAFLLFSPICVPPVSSAQTIDILRGASLFQQTCIGCHDAGGNIIQPGSTLFTKDLQRNGVDTEEEIHRVTYYGKGRMPGFGKECKPRGQCTFGARLEDEDIKILAEFVKLQADKGWPSIEIEEK 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03770 175 Pfam Cytochrome C oxidase, cbb3-type, subunit III 73 137 IPR009056 GO:0009055|GO:0020037
Vivi5g03770 175 FunFam Cytochrome c6, chloroplastic 69 173 - -
Vivi5g03770 175 PANTHER CYTOCHROME C6, CHLOROPLASTIC 23 172 IPR023655 GO:0005506|GO:0009055
Vivi5g03770 175 SUPERFAMILY Cytochrome c 52 168 IPR036909 GO:0009055|GO:0020037
Vivi5g03770 175 ProSiteProfiles Cytochrome c family profile. 71 163 IPR009056 GO:0009055|GO:0020037
Vivi5g03770 175 Gene3D - 69 173 IPR036909 GO:0009055|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03770 Vivi-Chr5 131653670 131657497 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03770 K08906 - gmx:100797820 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03770 5 131653670 131657497 Vivi5g03770 5 131653670 131657497 ECH