Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03572 ATGGCATTCTTCAACACTCTCCTCTCCCTCTCTCTCCTCCTTCTCCTCTCTTCCCATCTTTCTCTCTCCTCTTCCTCCTCCATTCATGACCTTCTCCGCTCAAAAGGCTTACCAGCTGGTCTCTTACCAGAAGAAGTAAAGTCCTACACTTTCTCAGAAAATGGCCACTTAGAAGTGTTCCTTGAATCACCTTGTTTAACAAAGTACGAAAATAGAGTCTACTTTGAACAAATAATCACTGCGAATCTTACATATGGAAGCCTCATTGGTGTTGAAGGTTTGCAACAAGAAGAGCTTTTTGTTTGGTTACCTGTTAAGGATATCATTGTGGATGATCCTTCTTCTGGTTTGATTCTCTTTGACATTGGTCTTGCTTATAAACAACTCTCTTTCTCTCTCTTTGAAGTTCCACCTCGTTGTAAACCTCAAGGTGTGTTGAAGAATGGTGTGAGAAAGGAGAAAGGTTTTGAGGCAGTGAGGTAG 483 0.4161 MAFFNTLLSLSLLLLLSSHLSLSSSSSIHDLLRSKGLPAGLLPEEVKSYTFSENGHLEVFLESPCLTKYENRVYFEQIITANLTYGSLIGVEGLQQEELFVWLPVKDIIVDDPSSGLILFDIGLAYKQLSFSLFEVPPRCKPQGVLKNGVRKEKGFEAVR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03572 160 Gene3D - 15 145 IPR036758 -
Vivi5g03572 160 Pfam Protein of unknown function, DUF538 29 135 IPR007493 -
Vivi5g03572 160 SUPERFAMILY At5g01610-like 7 143 IPR036758 -
Vivi5g03572 160 PANTHER T31J12.3 PROTEIN-RELATED 16 141 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03572 Vivi-Chr5 128313851 128315124 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03572 - - mtr:25492948 264.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03572 5 128313851 128315124 Vivi5g03572 5 128313851 128315124 ECH