Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03529 ATGGGTGGTCAACAACAGCATAAAAAGTCCAAGGTTGTGAAAATAGACTCATTGAAATCATGGGAACAGTACATCACAGAAGCTACAAATAAAGGCTACTTTGTTATGGTTCATTTCTCTGCTTATTGGTGCATGCCTTCTATTGCTATGGACCCTTTCTTTGAAGAATTGGCTTCCACCTATCAAGATGTAATCTTTCTCAAGGTGGATGTAGATGAGGTTAAGGAAGTAGCCACCAAGATGGAAATCAATGCCATGCCTACTTTTTTGTTGATGAATGGAGAAACTCCTGTGGATAAAATTGTTGGTGCAAATCCTGATGAATTGAGGAAAAGGATGGATCAACTCATTCCTCAAAATCCTTCTGTTGTATGA 375 0.3867 MGGQQQHKKSKVVKIDSLKSWEQYITEATNKGYFVMVHFSAYWCMPSIAMDPFFEELASTYQDVIFLKVDVDEVKEVATKMEINAMPTFLLMNGETPVDKIVGANPDELRKRMDQLIPQNPSVV 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03529 124 Gene3D Glutaredoxin 2 121 - -
Vivi5g03529 124 ProSiteProfiles Thioredoxin domain profile. 1 118 IPR013766 -
Vivi5g03529 124 Pfam Thioredoxin 18 114 IPR013766 -
Vivi5g03529 124 CDD TRX_family 19 114 - -
Vivi5g03529 124 PANTHER THIOREDOXIN 12 113 - -
Vivi5g03529 124 SUPERFAMILY Thioredoxin-like 9 119 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03529 Vivi-Chr5 127497184 127499251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03529 K03671 - gmx:100306379 188.734
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03529 5 127497184 127499251 Vivi5g03529 5 127497184 127499251 ECH
Vivi2g06760 2 206006465 206007571 Vivi5g03529 5 127497184 127499251 PCT