Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03527 ATGCTGCTGCATATATCATCAAATTTGGGACACATCACTGTACTTCCAAGAAAAGGGTTGAGAGAAAATTTCAAAGCGAGGATTGCATCGAGTAGATTTTCTTATCGGGCGCTCTTCTATTCACTATTGTTCTTCACCTTTCTTCTCCGATTTGTGTTTGTTTTGAAAGCAGTTGATAGCATAGACGGTGAAAACAAATGCTCTAACATAGGTTGTCTCGGAAGAAAACTGAGGCCAAAGATATTAGAAAGAAATAATTCATCAACTGTACCAGAGGAGATATATGCAACGTTAGATCAACCCCTTGACAAATATGGAATCGAGGGAAAATCGGATATTCCTCAGACTTTAGAAGAGTTCATGACTGAAATGAACAAAGGTGGATATGATGCCAAGACATTTGCGATTAAACTAAGAGAAATGGTAAGATTTATGCAACAAAGGACTAGGACCTCCAAAATCCAAGAACATTTATATCATCAAGTAGTATCGAACAGCATACCGAAACAGCTTCACTGTCTTGAATTGAGGCTGGCGAATGAGCACACGAACAATGCAGCTGCGCGCCTTCGGCTACCATCTTCAGAACTTTTTCCTGCTCTGGTTGACAATTCTTACTTTCACTTTGTTCTTGCCTCTGACAATGTGATTGCTGCCTCTGTGGTTGCAAAATCACTTGTTCGCAACAGTTTGCACCCTTGGAAAGTTGTTCTACACATAATTACAGATAGGAAGACTTATCATTCCATGCATGCTTGGTTTTCACTGCACTCTTTATCACCTGCTGTAATTGAGGTCAAGGCATTGCACCATTTTGATTGGTTTACAAAGAGGAAAGTGTCCGCGATAGAGGCAAAGGAAAAAGATCAAATTAAGCGGTCGCAGTTTAGAAGAGGATCATCAGTTATAGTTGCAAATATGAATGATAAGCCCAATACTGTTATTACAGCACAACTGCGAACACGTGGTCCCAAGTATAGTTCAGTGATGAACCACATTCGGATACATCTTCCAGAGCTGTTCCCTAGTCTTGACAAGATTGTCTTCCTGGACGACGACATTGTGGTACAAACTGATCTTTCGCCTCTATGGGACATTGACATGAATGGAAAAGTCAATGGAGCAGTAGAAACATGTAAAGGGGGCGATAAATTTGCAATGTCAAAGAGGCTAAAAAGCTATTTGAACTTCTCCAACCCTCTAATATCCAAATATTTTGATCCAAATGAATGTCATTGGGCTTATGGCATGAACATTTTTGACTTGAAAGCTTGGAGGAAGACCAATATAAGTCATACATACCACTATTGGGTTGAGCAGAATATAGAAGCAAACATGAGTTTGTGGCAGTTAGGAACATTACCTCCTGGATTAATAGCATTCCATGGTAATGTGCATAAAATTGACCCTTTCTGGCACATGCTGGGATTGGGATATCAGAAAAATACAAGAGTTGATGATGCTAAGAATGCCGGGGTTGTTCATTTCAATGGAAGGGCAAAACCATGGCTAGATATAGGTTTTCCACAACTAAGGCCATTGTGGAGTAAGTATGTTGATTTTTCAGATAAATTCATCAAAAGCTGTCACATTAGGGCATCATAA 1605 0.3969 MLLHISSNLGHITVLPRKGLRENFKARIASSRFSYRALFYSLLFFTFLLRFVFVLKAVDSIDGENKCSNIGCLGRKLRPKILERNNSSTVPEEIYATLDQPLDKYGIEGKSDIPQTLEEFMTEMNKGGYDAKTFAIKLREMVRFMQQRTRTSKIQEHLYHQVVSNSIPKQLHCLELRLANEHTNNAAARLRLPSSELFPALVDNSYFHFVLASDNVIAASVVAKSLVRNSLHPWKVVLHIITDRKTYHSMHAWFSLHSLSPAVIEVKALHHFDWFTKRKVSAIEAKEKDQIKRSQFRRGSSVIVANMNDKPNTVITAQLRTRGPKYSSVMNHIRIHLPELFPSLDKIVFLDDDIVVQTDLSPLWDIDMNGKVNGAVETCKGGDKFAMSKRLKSYLNFSNPLISKYFDPNECHWAYGMNIFDLKAWRKTNISHTYHYWVEQNIEANMSLWQLGTLPPGLIAFHGNVHKIDPFWHMLGLGYQKNTRVDDAKNAGVVHFNGRAKPWLDIGFPQLRPLWSKYVDFSDKFIKSCHIRAS 534
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03527 534 CDD GT8_like_1 207 520 - -
Vivi5g03527 534 Pfam Glycosyl transferase family 8 210 506 IPR002495 GO:0016757
Vivi5g03527 534 SUPERFAMILY Nucleotide-diphospho-sugar transferases 208 531 IPR029044 -
Vivi5g03527 534 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 209 526 IPR029044 -
Vivi5g03527 534 PANTHER GALACTURONOSYLTRANSFERASE 4-RELATED 110 531 IPR029993 GO:0047262
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03527 Vivi-Chr5 127480445 127483371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03527 1 534 Glycosyltransferase AT5G54690 69.403 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03527 K20867 - gmx:100812550 835.484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03527 5 127480445 127483371 Vivi5g03527 5 127480445 127483371 ECH