Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03494 ATGTTTTCCGCTAGCAAAATCAAAGCGGTTGATTTTTACAGAAAAATCCCTAGAGATTTGACTGAGGCGTCGTTGTCGGGAGCGGGGTTATCCATTGTGGCAGCTCTCTCCATGATGTTTTTGTTTGGAATGGAACTTAATAATTATTTTGCTGTCAGCACTACTACATCTGTGATTGTTGACAAAAGTTCTGATGGTGACTTTTTACGTATAGATTTCAATATGAGTTTTCCTGCTCTCTCTTGTGAGTTTGCATCGGTCGATTTGAATGACGTGCTGGGAACAAACAGGCTCAATATAACAAAAACAATTCGTAAGTTTTCTATAGATTCAAATTTAAGACCCACTGGCTCCGAGTTTCATTCGGGAACGATTGCAAATGCTGTTAAGCATGATGATGAAGTAGATGAAGAATTTGTTGAAGGAGCTTTGCCACTCACGTCACATAGCTTTGATAAATTTATTCAGCAGTTTCCAATTACAGTTGTAAATTTTTATGCACCTTGGTGTTCCTGGTGCCAACGTTTGAAACCTTCATGGGAGAAGGCAGCTAAAATAATGAGAGAGAGATATGATCCAGAAATGGATGGACGTATTCTGTTGGCAAAGGTAGATTGCACTAAAGAAAGTGATTTATGCAGGAGGCATCACATACAAGGGTATCCGTCTATTCGCATCTTTCGGAAAGGAAGTGATGTCAGAAGTGACCATGGACATCATGAACATGAGTCCTATTATGGAGATCGTGATACAGAAAGCCTAGTCAAGACAATGGAGAGTTTAGTGGCATCTCTTCCAACAGGATCTCAACATCTAGCTTTGGAGGATAAATCCAATGGAACTGAAAATGTAAAAAGACCCGCACCATCAACCGGTGGATGTAGAATTGAGGGATATGTACGTGTGAAAAAGGTTCCAGGAAGCTTGGTTATCTCAGCTAGATCAGATGCACATTCATTTGATGCTTCTCAAATGAACATGTCACATGTCGTAGACCATCTGACTTTTGGAAAAAAAGTGATGCCTAGAGCCTTGAGTGACGTGAAGCATTGGATACCATACATAGGAAGAAACCATGACAGGCTTAATGGACGGTCATTTATCAACACTCGTGATTTCGAAGGAAATGTTACTATAGATCATTATATTCAGGTAGTTAAAACAGAGGTAGTAACCAGAAAAGGTTATACATTAATCGAGGAGTACGAGTACACAGCACACAGCAATGTGGCACACAGCATAAACATCCCTGTTGCAAGGTTTCATCTTGAGCTCTCCCCCATGCAGGTCTTAATAACAGAGAACCAGAAGTCTTTTTCACATTTTATTACAAATATTTGTGCTATTATTGGGGGTGTTTTCACGGTAGCTGGAATTCTTGACTCGATTCTGCACAACACTATGAGGGCAATGAAAAAAGTTGAGCTTGGCAAGAATTTTTGA 1443 0.3992 MFSASKIKAVDFYRKIPRDLTEASLSGAGLSIVAALSMMFLFGMELNNYFAVSTTTSVIVDKSSDGDFLRIDFNMSFPALSCEFASVDLNDVLGTNRLNITKTIRKFSIDSNLRPTGSEFHSGTIANAVKHDDEVDEEFVEGALPLTSHSFDKFIQQFPITVVNFYAPWCSWCQRLKPSWEKAAKIMRERYDPEMDGRILLAKVDCTKESDLCRRHHIQGYPSIRIFRKGSDVRSDHGHHEHESYYGDRDTESLVKTMESLVASLPTGSQHLALEDKSNGTENVKRPAPSTGGCRIEGYVRVKKVPGSLVISARSDAHSFDASQMNMSHVVDHLTFGKKVMPRALSDVKHWIPYIGRNHDRLNGRSFINTRDFEGNVTIDHYIQVVKTEVVTRKGYTLIEEYEYTAHSNVAHSINIPVARFHLELSPMQVLITENQKSFSHFITNICAIIGGVFTVAGILDSILHNTMRAMKKVELGKNF 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03494 480 Pfam Endoplasmic reticulum vesicle transporter 289 461 IPR012936 -
Vivi5g03494 480 FunFam Protein disulfide-isomerase 5-4 131 287 - -
Vivi5g03494 480 Gene3D Glutaredoxin 140 286 - -
Vivi5g03494 480 PANTHER ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN 5 479 IPR045888 -
Vivi5g03494 480 Pfam Thioredoxin 145 243 IPR013766 -
Vivi5g03494 480 Pfam Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC) 8 97 IPR039542 -
Vivi5g03494 480 SUPERFAMILY Thioredoxin-like 144 261 IPR036249 -
Vivi5g03494 480 CDD PDI_a_family 144 258 - -
Vivi5g03494 480 ProSiteProfiles Thioredoxin domain profile. 114 263 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03494 Vivi-Chr5 127073285 127083353 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03494 - - aprc:113860202 857.055