Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03487 ATGCCGGAGCGAGAAGCAGGTTGGGATTTTTACCTTCGAACTCTATCTGCCAGTGCCAGAGATTCCAACACCGCTAACGATCCTGCTTCCGATCCCTCTCTTCTTCAATCCGTGAAGAAGCTTCATGAATTATGTAAGGCAGAGAATTCAGAAGACTTGGTAGCTAGGGTTTATCCGCAGATTAATAAGATTTTTCAGCGTGCTGTGGCTTCGCTCTCTCAATCTCAAACCTCCAATGGCCTTCTTTTACTCGAAATTCTTCAGTTTTACCTGGACTTTGGGGATGTTGTTCTTCATGATGCTGATCCTAGTCTTAGGACCTTTTTTCGATCATGCTTGAGCAGGGAGTTCGCTGATCCTGTGGTTGCAGAAGCAATGCTTGAATTTCTTATTATCAACAAGAAGAGGATTTTAACTTCTTTCCCTAACTTAATGCCTCAGTTTTTTCCGTTGTTGTTAAAGCTGATAGCTTGGAATGGGGAAAGATTAGAGAAACAAATTTTAAAAGCCTTCCCGGGATTGATGTCACCTGGTTCATTTATTCCATTGTTTCCATCTTTACTAGACTTGCCTATTTTGGTAGTGGCATTGGAGAAGGTGGAAAAAAACTCTGGACCACTAATTGGAAGCAGCATTGCTTCAATTCAAAAAAATACAGCTCCTAAGATGCTACTTGCCCTTATGGATGAAGCATATACTGGTTCAACTATAGAAGATGGTGGAGGGGATTCTGAAACTGAGGATAGCAGTGCAATTGATGTGGCTGATCCGTTGTTTCTTGAGATCTTAAAGGATGAAAATGATGGTATCGCAGAACGGCCCTGGTCATCATCAGTGATGACCACAATATTACAGACTGCAGTCAATAGTGCTTACTCTGATAGGTTAAAGGCAGTACTCCGCTTAACACCTTGTCTTCTTGACGTGTACTTTTCCATAGCACTGCGCGACGTGAATGATTCTTTGATCTGTGCGCTGGTTCCCCTGCTTATGTCAAGGTTTGCGACAATATTTCCAGACAAAATATTCTCTTATGAGGTTCATAAGCGGCTTTTGGAGTTTATGCTCTCCACATTTCAGCGCTACCCAAGCTTCATTGCTCTTTTAAAGAAACCTATAATGGACAGACTTGGAGAAGCTTATGACAGCCCAGACAAGACAGAATTGGCATTGCAATTATGTTGGGCCATTGGTGAGCATGGTGGTGGTGGTGGATCTCACAAAGACGAAGCCCGTGAACTTTTTGAGAGTTTAGAACTACTTCTGTATGAAAACCTTTCCTCGAGTCGTCTGGGCATGGCACAGGAGTTATCCCTTAGTTCTGATAAGGATACCTACAGAAGGTCATCACAGTCCAGGCTTATGTGTTTTGTTGTGACAGCCATTGCAAAGCTTGCTACGTATCACCGTGAATTACTACCAAGAGCACGTGTATCTTTGGGCAAGGTTGCTCGGTCTCGAATTTCTGATATGAGAGTATGGAGCCGAGCATGTGATTTCTTGGGTTTGATGAAAGACCCTGCTATATGTTCATCCATATTAGGCCCTTCACAGTCTTCACCAGGTACCCCACAGAAAATTGGCAGCATAAACTGGAAAGAAGGCGCTACAAAGATGACTGCACATATTCCATTTTACATTCTAGGTGAACAAGAAGGACCACCTTTTCATGATTTCTCTATCTCAGATATCCTTTCAAGAAGATGA 1707 0.4271 MPEREAGWDFYLRTLSASARDSNTANDPASDPSLLQSVKKLHELCKAENSEDLVARVYPQINKIFQRAVASLSQSQTSNGLLLLEILQFYLDFGDVVLHDADPSLRTFFRSCLSREFADPVVAEAMLEFLIINKKRILTSFPNLMPQFFPLLLKLIAWNGERLEKQILKAFPGLMSPGSFIPLFPSLLDLPILVVALEKVEKNSGPLIGSSIASIQKNTAPKMLLALMDEAYTGSTIEDGGGDSETEDSSAIDVADPLFLEILKDENDGIAERPWSSSVMTTILQTAVNSAYSDRLKAVLRLTPCLLDVYFSIALRDVNDSLICALVPLLMSRFATIFPDKIFSYEVHKRLLEFMLSTFQRYPSFIALLKKPIMDRLGEAYDSPDKTELALQLCWAIGEHGGGGGSHKDEARELFESLELLLYENLSSSRLGMAQELSLSSDKDTYRRSSQSRLMCFVVTAIAKLATYHRELLPRARVSLGKVARSRISDMRVWSRACDFLGLMKDPAICSSILGPSQSSPGTPQKIGSINWKEGATKMTAHIPFYILGEQEGPPFHDFSISDILSRR 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03487 568 PANTHER AP-5 COMPLEX SUBUNIT ZETA-1 3 567 - -
Vivi5g03487 568 Pfam AP-5 complex subunit, vesicle trafficking 30 154 IPR028222 GO:0044599
Vivi5g03487 568 SUPERFAMILY ARM repeat 41 465 IPR016024 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03487 K19025 - gmx:100796067 937.176
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03487 5 126884742 126892429 Vivi5g03487 5 126884742 126892429 ECH