Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03486 ATGAAAAGAGAGTGTCATCCATTGTTGAGAGGTGTTAGAGATAATAACAAATACAAACATGGTTTTTCTGTAGCTGAGATGGATTCACTCACAAGTATATGTGAAGCCGTGTTTCCTTCCTTACCAGTGGATGATGATGAGTCGAGCAACGATGTGAAGTCATTTTTCAACCTTTCTGCTTCTCGGTATCCATTGCCTCACGAGGTTGCTGAGGCCTTGGTAAAGAGAGGTTTAACAGAAGCGGTGATATTGATTAGAGTGATTCTATGGCTTCTATCGACGAGGTTGGGGACTTTTTTGATTTGTGGTTTTCTCTGTCTTAGTAAGAAATGGCCATTTATCAACAATTTCTCAAGCTTGTCTTTGGATCAAAGAGAAAAGATTGTGCAGAGGTGTCTCAAGCTTAGGTTCTTAACTCCTATTAGACTCGCATTTGTTTACATCAAAGTCCTATGCCTCTTCGGTTTCTTCTCTCGGGTTGATGAAAATGGTGATAATCCAGCATGGAAAGCCATTGGATATGAGGTATCATCATCTGATGAGGAAATGAGCAATCTCTCAGACAAAAAGAGGCCTTTAGAAAAGGGAATTATAGAAACCATGCATGAACATGACACAACTCTTCAACAATCTCTATCTAACAAAGGTCTCAATGTTACATTTGATTCCAAAAACAACATCCTCAAAATCAAATGTGATGCAGTAATTGTTGGTTCTGGCTGTGGAGGAGGAGTAGCAGCTTCTGTCCTTTCAAAAGCTGGCCACAAAGTCATTGTTCTAGAGAAAGGAAACTATTTCGTTCCTAAAGATTATTCATCGCTCGAAGGTCCTTCAATGGATCAACAATACGAATGTGGAGGCATGTTAGCTTCCGCTGATTCAAGAATGATTGTTTTAGCAGGTTCAACCGTTGGTGGCGGTTCAGCTGTTAATTGGTCAGCTTGTATAAAAACACCAAAAGAAGTGTTGAAAGAATGGTCAAAGGAACACAAACTTCCGCTCTTTGAAAGCTTAGAGTATCTATCTGCAATGGAAACCGTGTGCCAAAGAATTGGCGTGAACGAAAATTGTACACAAGAAGGGTTTCAAAATCAAGTACTGAGAAAAGGGTGTCAAAATCTCGGCTTAGAAGTTGATTATGTTCCAAGAAACTCGTCCGGGAATCATTATTGCGGTTCCTGTGGCTATGGTTGTAGAAAAGGAGAAAAGCAAGGGACTCAAGTTACATGGCTTGTAGATGCTGTTGAAAATGGTGCAGTGATAATAACAGGATGCAAAGCTGAGAGGTTTTTGTTTGAAAGTAATAAGAGGAAAGGAAGCATTAGAAAGAAGAAATGTTTGGGAGTGTCGGCGAAAATTTTAAACAGCAGAGTCACAATGAAGCTAGAGATTGAGGCTAGGGTGACAGTTTCTGCAGGTGGGGCACTTATGACACCTCCATTGATGATTTCTAGTGGTCTAAAGAATAGAAATATTGGTAGAAATCTTCATCTTCACCCTGTGTTAATGACATGGGGATACTTTCCAGAATCAAATTCAAATCTCAAAGGTAAAGTCTATGAAGGAGGAATAATCACATCTGTTCACAAAGTAAAATCATCAAGTGATGATTCGAATTCATATACAAGAGCGATAATCGAAACACCATTACTAGGACCAGCATCATTTGCAACACTATGTCCATGGGAATCAGGCCATGATTTCAAACAAAGAATGCTAAACTATCCAAGAACATCACATTTAATAACAATAATAAGAGACAAAGCAAGTGGACAGGTAACAAGAGAAGGAAGAATAAGCTACAAACTGAATTCATCAGACAAAGAGAATATGAGAAGTGGTTTACAACAAGCGGTGAGGATCTTAATAGCGGCCGGAGCGGTTGAAGTAGGAACACACAGAAGTGATGGACAGAGAATCAAGTGTTGTGATGAGAATATTAGTGAGAAGGAAATTGAAAAGTTTGTAGATAGTGTTTGTCCTGTGGAAGGAGCATTGTCACCAGGTGAGAATTGGAATATATATACTTCTGCTCATCAAATGGGAAGTTGTAGAATGGGTGTGAATGAAAAGGAAGGGGGTGTTGATGAAAATGGGGAGAGTTGGGAAGCTGAAGGATTGTTTGTTTGTGATGCAAGTTTGCTTCCTAGTGCTGTTGGCGTTAATCCTATGATTACTATTCAATCAACTGCTTATTGTATTTCAAATAGAATTGTTGATTATCTTGGAAAGGGTAATCAAGTATCATAA 2250 0.3907 MKRECHPLLRGVRDNNKYKHGFSVAEMDSLTSICEAVFPSLPVDDDESSNDVKSFFNLSASRYPLPHEVAEALVKRGLTEAVILIRVILWLLSTRLGTFLICGFLCLSKKWPFINNFSSLSLDQREKIVQRCLKLRFLTPIRLAFVYIKVLCLFGFFSRVDENGDNPAWKAIGYEVSSSDEEMSNLSDKKRPLEKGIIETMHEHDTTLQQSLSNKGLNVTFDSKNNILKIKCDAVIVGSGCGGGVAASVLSKAGHKVIVLEKGNYFVPKDYSSLEGPSMDQQYECGGMLASADSRMIVLAGSTVGGGSAVNWSACIKTPKEVLKEWSKEHKLPLFESLEYLSAMETVCQRIGVNENCTQEGFQNQVLRKGCQNLGLEVDYVPRNSSGNHYCGSCGYGCRKGEKQGTQVTWLVDAVENGAVIITGCKAERFLFESNKRKGSIRKKKCLGVSAKILNSRVTMKLEIEARVTVSAGGALMTPPLMISSGLKNRNIGRNLHLHPVLMTWGYFPESNSNLKGKVYEGGIITSVHKVKSSSDDSNSYTRAIIETPLLGPASFATLCPWESGHDFKQRMLNYPRTSHLITIIRDKASGQVTREGRISYKLNSSDKENMRSGLQQAVRILIAAGAVEVGTHRSDGQRIKCCDENISEKEIEKFVDSVCPVEGALSPGENWNIYTSAHQMGSCRMGVNEKEGGVDENGESWEAEGLFVCDASLLPSAVGVNPMITIQSTAYCISNRIVDYLGKGNQVS 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03486 749 Pfam GMC oxidoreductase 233 501 IPR000172 GO:0016614|GO:0050660
Vivi5g03486 749 Gene3D - 217 540 IPR036188 -
Vivi5g03486 749 Pfam GMC oxidoreductase 595 733 IPR007867 GO:0016614
Vivi5g03486 749 PIRSF Lg_Ch_AO 8 748 IPR012400 GO:0046577
Vivi5g03486 749 PANTHER LONG-CHAIN-ALCOHOL OXIDASE 17 746 - -
Vivi5g03486 749 SUPERFAMILY FAD/NAD(P)-binding domain 230 745 IPR036188 -
Vivi5g03486 749 Gene3D - 647 741 IPR036188 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03486 Vivi-Chr5 126874845 126877790 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03486 71 745 Acyl Lipid Metabolism Gene Families AT3G23410 61.947 0.0 839
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03486 K17756 - gmx:100799413 1172.15