Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03437 ATGATTTCTAACAATCAAAAGCAATACATGTGTGTTCTGTTCCTCATCCTTGCTCTCACTATCACCAATGTAATGTCCCGAAAGCTGCAACAATCATCATCATCCTTAGTAGAAAGACACGAGCAATGGATGACAGAATATGGCAAAGTATATAAAGATGATGCTGAGAAAGACAACCGTTTCATGATATTCAAGGACAATGTTGAATTCATTGAATCATTCAATGCTGCCAACAACAAACCTTACAAACTAAGCGTCAATCACCTAGCTGATTTGACCCTTGAGGAATTTAAGGCTTCCCGTAATGGTTACAAAAAGAAGTCTAGTGCTACTGAGTTAACTTCAACATCATTTAAGTATGCAGATGTGACTTCTATTCCAGCATCCGTAGATTGGAGGGTAAAAGGAGCTGTTACTCCAATCAAGGACCAAGGTCAATGTGGGAGCTGCTGGGCATTCTCAACTATTGCTGCAACAGAAGGTATCAACCAAATAACAACAGGCAAATTAGTATCTCTCTCAGAACAAGAGCTAGTTGATTGTGACACAAAGGGAGAAGACCAAGGATGTGAAGGAGGACTAATGGAAGATGGTTTTGAGTTTATCATCAAAAATGGTGGAATCACAAGTGAGTCTAATTATCCTTATAAAGCAGCAGATGGCAGTTGTAACACTGCAACAATTGTTCCTGTTGCAAAGATTAAAGGATACGAGAAAGTTCCGGTCAATAGTGAGGATGCACTTCTCAAGGCTGTGGCTAATCAACCAATATCAGTTTCTATTGATGCGAGTGATTCAAGTTTCATGTTTTATTCGCATGGAATATATACAGGAGAATGTGGAACTGAGTTAGATCATGGTGTTACAGCAGTTGGGTATGGAAGTGCAAATGGAAGTGATTATTGGTTGGTTAAGAATTCATGGGGAACAGTGTGGGGTGAGAAAGGATACATAAGGATGCAAAGAGGTATAGCTGCTAAGGAAGGCTTGTGTGGCATTGCAATGGATTCTTCTTATCCAACTGCTTAA 1029 0.3965 MISNNQKQYMCVLFLILALTITNVMSRKLQQSSSSLVERHEQWMTEYGKVYKDDAEKDNRFMIFKDNVEFIESFNAANNKPYKLSVNHLADLTLEEFKASRNGYKKKSSATELTSTSFKYADVTSIPASVDWRVKGAVTPIKDQGQCGSCWAFSTIAATEGINQITTGKLVSLSEQELVDCDTKGEDQGCEGGLMEDGFEFIIKNGGITSESNYPYKAADGSCNTATIVPVAKIKGYEKVPVNSEDALLKAVANQPISVSIDASDSSFMFYSHGIYTGECGTELDHGVTAVGYGSANGSDYWLVKNSWGTVWGEKGYIRMQRGIAAKEGLCGIAMDSSYPTA 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03437 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 284 294 IPR025660 -
Vivi5g03437 342 PRINTS Papain cysteine protease (C1) family signature 144 159 IPR000668 GO:0006508|GO:0008234
Vivi5g03437 342 PRINTS Papain cysteine protease (C1) family signature 286 296 IPR000668 GO:0006508|GO:0008234
Vivi5g03437 342 PRINTS Papain cysteine protease (C1) family signature 301 307 IPR000668 GO:0006508|GO:0008234
Vivi5g03437 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 301 320 IPR025661 -
Vivi5g03437 342 SMART Inhibitor_I29_2 40 97 IPR013201 -
Vivi5g03437 342 Pfam Papain family cysteine protease 126 340 IPR000668 GO:0006508|GO:0008234
Vivi5g03437 342 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 144 155 IPR000169 -
Vivi5g03437 342 Pfam Cathepsin propeptide inhibitor domain (I29) 40 97 IPR013201 -
Vivi5g03437 342 Gene3D Cysteine proteinases 17 342 - -
Vivi5g03437 342 FunFam Senescence-specific cysteine protease SAG39 19 342 - -
Vivi5g03437 342 SMART pept_c1 126 341 IPR000668 GO:0006508|GO:0008234
Vivi5g03437 342 SUPERFAMILY Cysteine proteinases 35 341 IPR038765 -
Vivi5g03437 342 CDD Peptidase_C1A 127 340 IPR039417 -
Vivi5g03437 342 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 29 335 IPR013128 GO:0008234
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03437 Vivi-Chr5 126206855 126207997 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03437 - - gmx:100802616 553.132