Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03432 ATGGCTCAATTATTGTCTCCAGTATACACAGAAGCTCTCAAAATCCATAATCCATCGCTGAATTTGTGTCACAGAACCTCATGGCAGATGCTGCACAAATCTCCAACTAGTCCTTGGAGTTTTGCAACACGAAGTGGCAAACGAAGAGGTTTTGGTAGGGTTAAAGTTGCTACTGATCAGGATTCGTTTTCAACCAGTGACACTGTAGGAGCTGAAGACTATTATGCAGTTTTGGGTCTGCTTCCAGATGCAACACCAGAGCAGATCAAGAAGGCTTACTATAATTGTATGAAAACTTGCCACCCAGATTTGAGTGGCAATGATCCTGAAACAACGAATTTCTGTACCTTCATCAATGAAGTTTATGAGGTGCTCAGTGATCCGGTTCAGCGTAGGGTTTATGATGATATTCATGGGTATTCTTTTACATCTATTAATCCTTTCGCGGATGAGTCTAGTCCGAAGGATCATGTTTTTGTCGATGAGTTCAGCTGCATAGGCTGCAAAAATTGTGCTAATGTGGCCTGTGACGTGTTTGAAATTGAGGAAGACTTTGGAAGAGCCAGAGTTTACAGTCAGTTTGGGAACCCGGATTTAGTTCAACAGGCTATTGATAGTTGCCCTGTTGACTGCATTCATTGGACATCAGCTGCACAATTATCATTACTTGAAGATGAAATGCGCCGCATAGAAAGAGTCAATGTTGCTCTGATGCTTTCAGGAATGGGATCAGCTATAAGCGATGTTTTCAGAATGGCGAATACCCGATGGGAGAAAAGGCAGTTAAACTTCTTGGCACAAGCGAGAATGAGAATGATGAAGCAGAAAGGTTATGACAAGACAAATTCATACTGGGATAATCTCCGCGGAAAACCAAGAGACTACGAAAGTTCAGAGGAGGAAGGGAAAGAAAGAGCTAAAAGAGCTGCAGCTGCTGCTAGAAAATGGAGGGAATACTCAAGAAAAGGTGTTAGTAAGTCCCCCTCATTCAAGCTTCCAGAGGCAACTTCCACCAAGGACAAGTGA 1026 0.4279 MAQLLSPVYTEALKIHNPSLNLCHRTSWQMLHKSPTSPWSFATRSGKRRGFGRVKVATDQDSFSTSDTVGAEDYYAVLGLLPDATPEQIKKAYYNCMKTCHPDLSGNDPETTNFCTFINEVYEVLSDPVQRRVYDDIHGYSFTSINPFADESSPKDHVFVDEFSCIGCKNCANVACDVFEIEEDFGRARVYSQFGNPDLVQQAIDSCPVDCIHWTSAAQLSLLEDEMRRIERVNVALMLSGMGSAISDVFRMANTRWEKRQLNFLAQARMRMMKQKGYDKTNSYWDNLRGKPRDYESSEEEGKERAKRAAAAARKWREYSRKGVSKSPSFKLPEATSTKDK 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03432 341 PANTHER OS01G0730500 PROTEIN 1 322 - -
Vivi5g03432 341 SMART dnaj_3 72 130 IPR001623 -
Vivi5g03432 341 SUPERFAMILY Chaperone J-domain 71 165 IPR036869 -
Vivi5g03432 341 PRINTS DnaJ domain signature 110 130 IPR001623 -
Vivi5g03432 341 PRINTS DnaJ domain signature 75 93 IPR001623 -
Vivi5g03432 341 PRINTS DnaJ domain signature 93 108 IPR001623 -
Vivi5g03432 341 Pfam DnaJ domain 73 135 IPR001623 -
Vivi5g03432 341 CDD DnaJ 73 127 IPR001623 -
Vivi5g03432 341 Gene3D DnaJ domain 56 147 IPR036869 -
Vivi5g03432 341 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 156 186 IPR017896 -
Vivi5g03432 341 SUPERFAMILY 4Fe-4S ferredoxins 157 214 - -
Vivi5g03432 341 Pfam 4Fe-4S single cluster domain of Ferredoxin I 160 214 - -
Vivi5g03432 341 MobiDBLite consensus disorder prediction 283 341 - -
Vivi5g03432 341 Gene3D - 156 216 - -
Vivi5g03432 341 ProSiteProfiles dnaJ domain profile. 73 138 IPR001623 -
Vivi5g03432 341 MobiDBLite consensus disorder prediction 286 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03432 Vivi-Chr5 126099752 126102444 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03432 - - vra:106778489 518.464
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03432 5 126099752 126102444 Vivi5g03432 5 126099752 126102444 ECH