Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03416 ATGGCTTCCGTCGATGTTATCAAATCCTGCATCGACTCCATTAGACAGATATCAGAACATATTGAAGGTGCAGTTGTTTATCTAGATGCTGGAGCTACAGAGAGTTTCCAATTTATTGGAGCTTATCCTGTACTTCTTGAACTTGGAGCGCGGGCTGTCTGTAGTTTGGAAAACATGACTGTACTGGATTCGGTGGGTGATTGGAACTCGCATTCTGATCCTGCGAGAAAACTCGTGGTTATCATATCGCGCCTACTAAGTGACGCACATCGGTATATTTTGCGTTGTCTGTCGTCACATCAAGCTGTTCGTCATTGCACTATATTTACATCTATCTCTGAGATGGCTCACTCAGTGTTTCCTGATTCACCTCTCGGACCAGATGCATATCATGAGTATGAATCTTTACTAGTTCAAGATTATGAAGAGCTAAGTAAAAAATCTGGGGAAAAACCTAGGCATATTGGTAGCCTCTTACAGGAAAAGCTTAACCTTGAAGATGGAGGCCGCTTGCAGTTTTCTTCCGGTGGAGAGGATGTTCCTCATCTTGAAGCTAGTTCAAGTGGAAGAGATTTTTATGAAAACAATCCATTAGACTATATTGCAGATACTGTGCAGAAATTGGTTATTTCTGTTCACCATTTTCCCATGATTTTATGTCCCATTTCCCCCAGAGCATTTGTTCTTCCTTCAGAAGGATTGGTGTCTGAATCATACTTATCAGCTGAACATGAAGATTCCATTAGTCCTGGTTTGCCTCCCTTAAGTACTGGCTTGCTCTCCAACACTGATGATGTGCCTCCTGGGGCAACTCTTACAGCACACTTTCTCTACCATTTGGCAGCCAAGATGGACTTGAAAATGGAAATTTTCTCCCTCGGTGATACGTCGAAAACTGTTGGGAAAATTTTGACTGACATGTCAAGTCTTTATGACATAGGCCGCCGTAAACGGTCTGCAGGGCTTTTACTCATTGATCGCACACTCGATCTTCTCACTCCATGTTGTCACGGGGACTCACTTATGGACCGTATATTTTCTGCTTTGCCCCGTAGAGAAAGAATAAGTTCCCACGTAGGTTCAGGAAGCCAACTCAAACTTGGTTCTTCTTACCTTCATCGTGCTCCTTTAGATGTTCAGATACCACTTGCAAAGATCCTTAATGAAGAAGATTGGAAAATAGACAATTTTCGGCTTTTAGAGAGCGTTGAAGCTTTTTTATGCGGGTGGAACTCTGGTAATTCCGATTCTCAGGTTGCAGACTTGATTAATCTAAATAAAAAAATTCATGACAAGCCTTGTCACGCCGGTATAGATATACTCACTGGGTCTTTTGTCTCCTCTGATCATTTTCGCGGCATGCCATTCTTGGAAGCTATACTAGATAGAAGAACAAAAGATGGGGCCTTACTGGTAAAGAAATGGCTACAAGAAACTTTGCGCAGGGAAAATGTTACTGTGAATGTGAAATCTCGTCCTTCTATTGTTACAACACCTGAGTTGCAAGCTATGATCAAAGCATTGTCCAGGAGCCAATCATCTTTTCTAAGGAACAAAGGAATTATCCAATTAGCAGCAGCCACATTATCAGCCCTTGAGGAATCAAATTGCACCAAATGGGATGCATTTAGCAGTGCAGTGAAAATTCTGAGTGTAAGCTCTGGAGAAACCAGTCAAAGTCTTGCCGCTCAAATCGGTGATCTCATAAATAAGAGTGCTCTGTTGGGATCACACGTAAATAAAGGGAAAGGAGATATCTCAAAGGGTCTGATTTCCTTGCAAGATGCTTTGCTGTTAATGATCATCGGATATATTTTGGCAGGTGAGAATTTTCCAACTTCTGGTTCTGATGGGCCATTTTCTTGGCAAGAGGAACGTATGTTAAAAGAAGCCGTTGTAGATGCTCTTCTTGAAAACCCATCGGTAGTAAATCTAAAGTTTCTAGATGGACTAAAGAAAGAACTTGAAGCTAATGTAAGCAAGTTAAAATCAGAGGAAGCTACTGAAGAAGTGCTGGAGATTGATGATTTTGATGATGATCAATGGGGAAAATGGGGTGAAGAAGATGATGAGGATGATAATAAAAATGAACAAGCATATGGTGACATGCAACTAAAGTTGGAGTTGCGTGATAGGGTGGATAGCTTTTTCAAATTTCTTCATAAATTATCTGATTTGAAAAGAAAGAATGTTCCATTGAAGGATGGTTCATTGACCGTGGGAGGCAATTTCGATGAGGATACCTATGTAGGGAAAGGGTTGGTTTATAAGCTACTGACTAGGGTGCTGGGCAAGTACGATGTGCCTGGATTAGAATATCATTCTTCCACTGTGGGGCGCCTGTTTAAGAGTGGGTTTGGAAGATTTGGCCTTGGTCAGGCTAAACCAAGTCTTGCTGATCAAAATGTCATTTTGGTGTTTGTCATTGGAGGCATTAATGGACTAGAGGTGCGTGAAGCAATGGAGGCATTGGCTGAAAGCGGAAGACCTGATATAGAGTTGCTTGTTGGTGGGACAACTCTTCTTACTCCTGATGATATGCTCGATTTACTGCTAGGGGATTCAAGTTACTTTTAA 2577 0.416 MASVDVIKSCIDSIRQISEHIEGAVVYLDAGATESFQFIGAYPVLLELGARAVCSLENMTVLDSVGDWNSHSDPARKLVVIISRLLSDAHRYILRCLSSHQAVRHCTIFTSISEMAHSVFPDSPLGPDAYHEYESLLVQDYEELSKKSGEKPRHIGSLLQEKLNLEDGGRLQFSSGGEDVPHLEASSSGRDFYENNPLDYIADTVQKLVISVHHFPMILCPISPRAFVLPSEGLVSESYLSAEHEDSISPGLPPLSTGLLSNTDDVPPGATLTAHFLYHLAAKMDLKMEIFSLGDTSKTVGKILTDMSSLYDIGRRKRSAGLLLIDRTLDLLTPCCHGDSLMDRIFSALPRRERISSHVGSGSQLKLGSSYLHRAPLDVQIPLAKILNEEDWKIDNFRLLESVEAFLCGWNSGNSDSQVADLINLNKKIHDKPCHAGIDILTGSFVSSDHFRGMPFLEAILDRRTKDGALLVKKWLQETLRRENVTVNVKSRPSIVTTPELQAMIKALSRSQSSFLRNKGIIQLAAATLSALEESNCTKWDAFSSAVKILSVSSGETSQSLAAQIGDLINKSALLGSHVNKGKGDISKGLISLQDALLLMIIGYILAGENFPTSGSDGPFSWQEERMLKEAVVDALLENPSVVNLKFLDGLKKELEANVSKLKSEEATEEVLEIDDFDDDQWGKWGEEDDEDDNKNEQAYGDMQLKLELRDRVDSFFKFLHKLSDLKRKNVPLKDGSLTVGGNFDEDTYVGKGLVYKLLTRVLGKYDVPGLEYHSSTVGRLFKSGFGRFGLGQAKPSLADQNVILVFVIGGINGLEVREAMEALAESGRPDIELLVGGTTLLTPDDMLDLLLGDSSYF 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03416 858 Gene3D - 747 852 IPR027482 -
Vivi5g03416 858 Coils Coil 645 672 - -
Vivi5g03416 858 PANTHER VESICLE PROTEIN SORTING-ASSOCIATED 13 851 IPR001619 GO:0016192
Vivi5g03416 858 SUPERFAMILY Sec1/munc18-like (SM) proteins 771 852 IPR036045 -
Vivi5g03416 858 SUPERFAMILY Sec1/munc18-like (SM) proteins 204 338 IPR036045 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03416 - - gmx:100804041 1349.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03416 5 125909058 125914688 Vivi5g03416 5 125909058 125914688 ECH