Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03406 ATGTCTTCAAGTGGTAGCAACATTCATGGCAAGAATATGGAACAAGAATCACCAAGCATCCCAACAGTGACACTTAGCCGCTACGAGTCTCAAAAGAGAAGAGACTGGAACACTTTTGGTCAATACTTGAACAACATGAGACCACCAGTTCCACTTGCACAGTGCAACTCTAACCATGTGTTGGATTTTCTTCGTTACTTGGACCAGTTTGGAAAAACTAAGGTTCACTTACTAGGTTGTATGTTTTATGGACAACCGGAACCACCTGCACCTTGTACTTGTCCTCTTAGACAAGCTTGGGGAAGCTTGGATGCTCTTATAGGAAGACTTAGAGCTGCTTATGAAGAAAATGGTGGGTCTCCTGATACTAACCCTTTTGCTAGTGGCTCTATAAGGGTTTATCTTAGGGAGATCAGAGAGTGTCAAGCTAAGGCTAGAGGTATACCTTACAAGAAGAAAAAGAAAGGATCAAATCAAAGCAAGGGAAGTGAAGAATCAAGTTCTAGTACTATGAACTTTTCTTGA 525 0.4152 MSSSGSNIHGKNMEQESPSIPTVTLSRYESQKRRDWNTFGQYLNNMRPPVPLAQCNSNHVLDFLRYLDQFGKTKVHLLGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGSPDTNPFASGSIRVYLREIRECQAKARGIPYKKKKKGSNQSKGSEESSSSTMNFS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03406 174 ProSiteProfiles ALOG domain profile. 27 154 IPR006936 -
Vivi5g03406 174 PANTHER PROTEIN G1-LIKE2 15 168 IPR040222 -
Vivi5g03406 174 MobiDBLite consensus disorder prediction 146 174 - -
Vivi5g03406 174 Pfam ALOG domain 20 140 IPR006936 -
Vivi5g03406 174 MobiDBLite consensus disorder prediction 1 27 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03406 Vivi-Chr5 125680379 125682722 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03406 - - gmx:100815968 266.544
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03406 5 125680379 125682722 Vivi5g03406 5 125680379 125682722 ECH
Vivi2g07081 2 213035255 213042231 Vivi5g03406 5 125680379 125682722 ECH
Vivi2g07081 2 213035255 213042231 Vivi5g03406 5 125680379 125682722 PCT