Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03381 ATGCCCACAACACAAACCTTCGTTTTTCCAAGGTACCTTCCTCTCTTTCTTCTTCTGATCCTTTCTCCGCTTTGCGGCGGCTCCGGTGGCGGAGACACTACGAAACAGGAGCTATGGTGCGTGGCCAAAAACAACGCGGAGGATGCCGCTTTACAGTCGGCACTCGACTGGGCCTGTGGTGCCGGTGGAGCAGATTGCCGCCCAATCCAGAACGGAGGACCTTGCTACGATGTTAACAGTGTCCAGAATACGGCGTCGTTTGCTTTCAATGATTATTTTCTCAAGAACGGTTTGACTGATGATAGCTGCAATTTTAGTAACAATGCTGCTGTTACTTCCATTGACCCTAGTCATGATAAATGCAAGTTCCCATCTGGTTTGGCGGCAATCAATGGAAGTTCTTCTGGATCAAAATCATCACCGTCTGCTGGATTGGGACCTAGCGGAAATGTGAGTGGATGCAGTAAAGCTTCTTGGAGGTGGTGGTTTTGGCTATCAGCCATCACTAATTTGCTACTCATGGTTTCACTTTATGCATAA 540 0.4815 MPTTQTFVFPRYLPLFLLLILSPLCGGSGGGDTTKQELWCVAKNNAEDAALQSALDWACGAGGADCRPIQNGGPCYDVNSVQNTASFAFNDYFLKNGLTDDSCNFSNNAAVTSIDPSHDKCKFPSGLAAINGSSSGSKSSPSAGLGPSGNVSGCSKASWRWWFWLSAITNLLLMVSLYA 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03381 179 Gene3D - 32 135 - -
Vivi5g03381 179 SMART X8_cls 38 123 IPR012946 -
Vivi5g03381 179 PANTHER BETA-1,3 GLUCANASE 24 138 IPR044788 -
Vivi5g03381 179 FunFam Glucan endo-1,3-beta-glucosidase 4 33 127 - -
Vivi5g03381 179 Pfam X8 domain 38 109 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03381 Vivi-Chr5 125098946 125100502 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g03381 22 126 Glycoside Hydrolase AT4G26830 43.396 1.56e-24 97.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03381 - - gmx:100784423 236.113