Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03331 ATGGATTCTTCCAATTCTACCCCTCACCGTCATCACCACCGTTCATCAGAACGCCGAACCAATTCCCGAACCTCTCCCCTATCCCGCATTGGTGAAATAACCGCCACCGAACCTCTTCGTATATCACTCGACCTCGATCAATCACCAACCATCGCTAAAAAGCCACCATCATCGCCTTCACCGCTATCTCTTCTCCGATCTCCAAAATCTCCAACACGATGTTTTCCACTCAGGGAGCTTCTTCTCATGTCCCCTCCGTCTTCCAGGAAATCCAAGCCGAGGTTTGATGACGAGATGCAGGAGTCGAACAGTCTGAGAAGGCGGTGTAGGGCGAGTCTGTCTTCGCCGAGAAACTCGCGGAGGTCGAGACGGAGATCCGAGGTTGAGGTTAGGGAAGAAAAGGAGATTGCGTTGATGGATGAGGTTGGGAAACAAAGGAAGAGAAGAAACAGTGGGAGACATAAGAAGGATAAACTCAGTTTGGTGCCTTTTCAACCACCAAAAGCTGAAGAAGAGAATGGAGGCGATTTGGATCGCATTGGAATGTTGATTGCTGAATTAATCATGTGGAACGATGTGCAAAAATCAACCTTTTGGTTTGGTTTTGGATCTCTTTGTTTCTTGTCTTCTTGCTTCACCAAAGGGATCAATTTTAGCATCTTTTCTGCTATTTCACAATTGGCAATTCTATTTTTGGCTCTTTCTTTTATCTCAAATTCTGTTTGTCAAAGAGAGCAAGCTAAGCAAAGTGGTTATGCCAAACTAAAAGAAGATGATATTTTGCGTCTTGCAAAATTGATTCTTCCTGCTTTGAATTTTGCAATTTCAAAGACGAAAGGGCTGTTCTCTGGAGAACCATCTATGACACTGAAAGTAGCTCCTTTTCTTCTACTAGGAGCACAGTATGGCCATCTTATTACAATTTGGAGGCTCAGTGCCATTGGTTTTTTTGTCAGCTTCAGTGTACCAAAGCTTTATTCTTGCTACTCTGCTCAGATCAATCAGCGAGCTGAGTGCTTGAAATTGCGATTGTTGGACTCATGGAGTGCTTGCGGTCACAAGAAGATAGTGGTCATGTCGGCCCTTATTATCTTTTGGAACCTGTCTTCTATAAAGACTCGAATCTGCACAGGATTTTTATTGGTTGTAATATTCAGATGCATTCGACAAAATGTCCTACAAAAAGTAGAAGACAGAGAAGCATATGCGGCAGACAAGGAACAGCGACATGTATCATTAGTTGCAGAACCAGTGGATGAGAAACCACATCAGGCACTACAAGTTGCTGCCTAA 1293 0.4377 MDSSNSTPHRHHHRSSERRTNSRTSPLSRIGEITATEPLRISLDLDQSPTIAKKPPSSPSPLSLLRSPKSPTRCFPLRELLLMSPPSSRKSKPRFDDEMQESNSLRRRCRASLSSPRNSRRSRRRSEVEVREEKEIALMDEVGKQRKRRNSGRHKKDKLSLVPFQPPKAEEENGGDLDRIGMLIAELIMWNDVQKSTFWFGFGSLCFLSSCFTKGINFSIFSAISQLAILFLALSFISNSVCQREQAKQSGYAKLKEDDILRLAKLILPALNFAISKTKGLFSGEPSMTLKVAPFLLLGAQYGHLITIWRLSAIGFFVSFSVPKLYSCYSAQINQRAECLKLRLLDSWSACGHKKIVVMSALIIFWNLSSIKTRICTGFLLVVIFRCIRQNVLQKVEDREAYAADKEQRHVSLVAEPVDEKPHQALQVAA 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03331 430 MobiDBLite consensus disorder prediction 120 147 - -
Vivi5g03331 430 MobiDBLite consensus disorder prediction 1 173 - -
Vivi5g03331 430 PANTHER RETICULON-LIKE PROTEIN B17 99 412 IPR044647 -
Vivi5g03331 430 MobiDBLite consensus disorder prediction 90 105 - -
Vivi5g03331 430 Pfam Reticulon 185 338 IPR003388 -
Vivi5g03331 430 ProSiteProfiles Reticulon domain profile. 184 335 IPR003388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03331 Vivi-Chr5 124388616 124390764 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03331 - - tpra:123913615 518.079