Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03326 ATGGCGGTGGCGGAGGGAATTGGAGGTAGCGGTGGCACTGGCACCACTATCATTGACGAAACGTACGAGTTCTCTGCACCGCGTTTCTTCGATTTCACGAAAGAGGAATCGGAAGATGAAATCCGTAAGGCTGAGCTCTGGTTTCACACTGCTCTCTCTTACGCTCCTTCTCCATTCATGCCTAAAATCAAGGCTGGTAGATCCATTACTGTAGGTACCTTATGTGATTTTAGTGAAGCTGACAATATGCCAAAGATGTCGGCAAATGTTGAAGATGCTCTCGAATCAAATACACAACAAGTAAGCATAACTAGCAACATAAAGGAAGATGATAGAGCCAAGGAGGAAAAGCTTACAGGAGTTACTCGCATGATTTCTGCCGATAAGAAAGAAGAGAGTAATTCAATGGATTCTGATAAGGTTTCTGTTGGTAAGCCAACAAGTGATCGTAAAGGGGAGAGCTCAAAAGTAGCAACATCCATAGGACCATCGTTTGAAGTAGGAAAAGACGCTTGCACGCCGAAACCAGAATTGCGGAAAAATGTCAATACCGCTTCCACTAATTCCAAGAAGCAACAGAACTCTAAGAAGGTATCTACGAATACCAAAACCCGGTTACAGTCAGCAGTCACAAATAGCACTGCAGTGACTCCCCACTTCACCCAAGAGAATCAAGCTATTAAGAGGCAAAAATTGGAAGAAGGGAAAACTAGACAGATTTTGAATCTCAAACCTCGAATTCTGTCGCATGATAAATCAAAATTGGGTTACTCTTCAAGTACTACTAAAACTCACGAAAAGGACAGAAAGGTTTATGTTCGTGAACCAAAAACAGCCCCACCTGCGCCATTTGTATCAATGGCAGAAATGATGAAGAGATTCGAGTCTAGCACTAGAGACTTACCACTGCACAACAATATTTCTCATTCAAAACCAAAACTTGCATTGACCAGACCCAAAGAACCCGAACTTGAGACAAATCAGCGGGCTCGCCCATCTAGAATGAAGAGTGCTGCTGAGCTTGAGGAAGAAATGATGGCTAAAATTCCCAAATTCAAGGCTCGGCCTGTGAATAAGAAGATTCTGCAAACTCCAACTTTGCTTCCCATGCCAAGAAGTGAACCACAGCCACCAGAGTTCAAGGAATTTCATCTAGAAACATTGGCTAGAGCTCATCAAAATATAGATTCAGCTTCCAAAGCCTCATCAGAGGTTTCACATAAGGAAAAATCACTGAAAACTCATCTTAATGAACCTAAACCTCCACTGCTCCAAACAACACTAAGGGCTCGCCCACCAACCGTGAAAAGCTCATTAGAAATAGAGCAAGAGGAACTTGAAAAGATTCCTAAATTCAAGGCTAGACCTCTAAATAAGAAGATCTTTGAGAGTAAAGGAGATATTGGAATATCCTGCCATATGAAGAAACATGTCACCGAACCGCAAGAATTTCACTTTGCCACAAATGAGAGGTTTCCACCATCTGGCTCCGTGGCTGATTTATTTGACAAGCTTTCTTTGAAGTCTGAACCTGCGCGTCACAAGACAGTTCCAAGAATCACTACTCCGAATCCATTCCATCTTCACACCGAGGAAAGAGGAGCTGAGAAAGAGAAGAAACTATTCCTAGAACTCTTGGAGAAACAATTAGAAGAGGAAGCAACAAGGGTTCCAAAGGCTAACCCATATCCGTATACCACTGATTATCCCGTGATCCCACCGAAGCCAGAACCCAAGCAATGCACAAAACCAGAGCCATTTCAATTGGAGAGCCTAGTGAGACATGAGGAAGAAATGCAAAGGGAACAAGAAGAAAGACTTAGAATGGAAAGAGAGGAAGCACAGAGGAGAAAATTTAAGGCACAGCCAGTATTAAAAGAGGATCCAATCCCAGTTCCGGAGAAGGTACGCAAACCCCTTACACAAGTTCAAGAGTTTGATCTACATTTGAATCATCGAGCCGTGGATAGAGCGCAATTTGATGGGAAGATTAAGGAGAAAGAAGCGTTGTATAAACGCCACCGAGAAGAGAGTGAAGCAGCAAGTAAGATTGAGGAAGAGAAGGCACTGAAACATATGAGAAGAACGATGGTTCCTCATGCTAGGCCGGTTCCAAGTTTTGACAAGCCATTTGTTCCCCAAAAAACTTCTAAAACAACAAAACCCAAGTCACCAAATTTGCGTGTACTCCATAGAAGACGGAAGGTCCACGGTTCTGCAGTCTCTAGTCCTGCAACTAACATGCGATGA 2250 0.4311 MAVAEGIGGSGGTGTTIIDETYEFSAPRFFDFTKEESEDEIRKAELWFHTALSYAPSPFMPKIKAGRSITVGTLCDFSEADNMPKMSANVEDALESNTQQVSITSNIKEDDRAKEEKLTGVTRMISADKKEESNSMDSDKVSVGKPTSDRKGESSKVATSIGPSFEVGKDACTPKPELRKNVNTASTNSKKQQNSKKVSTNTKTRLQSAVTNSTAVTPHFTQENQAIKRQKLEEGKTRQILNLKPRILSHDKSKLGYSSSTTKTHEKDRKVYVREPKTAPPAPFVSMAEMMKRFESSTRDLPLHNNISHSKPKLALTRPKEPELETNQRARPSRMKSAAELEEEMMAKIPKFKARPVNKKILQTPTLLPMPRSEPQPPEFKEFHLETLARAHQNIDSASKASSEVSHKEKSLKTHLNEPKPPLLQTTLRARPPTVKSSLEIEQEELEKIPKFKARPLNKKIFESKGDIGISCHMKKHVTEPQEFHFATNERFPPSGSVADLFDKLSLKSEPARHKTVPRITTPNPFHLHTEERGAEKEKKLFLELLEKQLEEEATRVPKANPYPYTTDYPVIPPKPEPKQCTKPEPFQLESLVRHEEEMQREQEERLRMEREEAQRRKFKAQPVLKEDPIPVPEKVRKPLTQVQEFDLHLNHRAVDRAQFDGKIKEKEALYKRHREESEAASKIEEEKALKHMRRTMVPHARPVPSFDKPFVPQKTSKTTKPKSPNLRVLHRRRKVHGSAVSSPATNMR 749
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03326 749 Coils Coil 592 622 - -
Vivi5g03326 749 MobiDBLite consensus disorder prediction 179 212 - -
Vivi5g03326 749 MobiDBLite consensus disorder prediction 396 425 - -
Vivi5g03326 749 Pfam Cell cycle regulated microtubule associated protein 315 486 IPR027330 -
Vivi5g03326 749 MobiDBLite consensus disorder prediction 107 152 - -
Vivi5g03326 749 MobiDBLite consensus disorder prediction 103 212 - -
Vivi5g03326 749 MobiDBLite consensus disorder prediction 698 749 - -
Vivi5g03326 749 Pfam Targeting protein for Xklp2 (TPX2) domain 646 720 IPR027329 -
Vivi5g03326 749 Coils Coil 667 687 - -
Vivi5g03326 749 PANTHER TARGETING PROTEIN FOR XKLP2 578 733 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
Vivi5g03326 749 MobiDBLite consensus disorder prediction 402 416 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03326 Vivi-Chr5 124182735 124189533 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03326 K16812 - gmx:100801192 954.51