Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03305 ATGGGAGGGTTAGGGAGGAAAGGGACAGTGACACCACTTGAGTCACAGTTCCCCGTAGAGGAGGTGAACAAGGCCACTAAGCAATTCCAAGATGCCATTGCCGAAAAGAACAAAGAGCTTCACGTCCTACAACGTTTTGTCGCCGACAACAACAACCTTGTCAACCTCGTCCAGAAACTCCCCGAACAACTCTCTCATGATGTCATGGTTCCGTTTGGGAAAGCTGCGTTCTTCCCTGGTCGTTTGATCCATACCAACGAGTTCATGGTTCTTTTGGGAGAAGGGTATTATGCAGACAGAACTTCCAAACAAACTGTTGATATTTTGCAACGAAGAGGGGAGTCCTTGAATTCTCAGGTTGATTCACTTCAGGCCATGATCAACAACCTTTCCTCCTTTATCAATGTCACAGATTCTGAAGTAGCGGAGGGTCTTGTGGAAATAAGAGAAGAATATGTGGAAGACGACTCTGAAGAAGATGAATCTGAATCAGATTCTGCTATTGAAGATGTTCCTAGTTCTGGGAATGATACATCCAAAGAAGTGGACTATGCTTCATTTTTGTCTTTAATGGATGAACTTGAGAAAGAAGAAGCACTTGCTGAAGAAAATGGCAATGACAGTGATCCGAGTGAGGAAACTACTGATGATTTTGATGATAGTCCATATCAGAGACCTGCCGATCGTATTCCCCCAAATCAAAATGAGTTTCCAAAAAGGCATAATCATCAAGAAGATATAGCTGATCAGTTGAATTTTGCGAACCTTGCTGTTCAATCTCAGGTTAAAGAAGGGAAAATTTTATCACAAAATGTGTCATCCATTGATCCTAGTGTGAAGCCGCCCATAGTTCCTAAAGAGAAGATATCTCGAGCAACTTCGGCATCGGAAATTGAGGTTCAACATCAAACTTCACAACCATCATTTGATCGTCGCAAGGCTTTTACAGGCTCCATCGTAGAGCATGGCGAGAATTTAAAAAAAGGTTCAAGAGAACAAAGTTCATCTTCACAGGTTTCTGGTTCTCATCCTGTAAAACCAGTCTCCAGATTCAAAATGCAGAGAAAATAG 1071 0.422 MGGLGRKGTVTPLESQFPVEEVNKATKQFQDAIAEKNKELHVLQRFVADNNNLVNLVQKLPEQLSHDVMVPFGKAAFFPGRLIHTNEFMVLLGEGYYADRTSKQTVDILQRRGESLNSQVDSLQAMINNLSSFINVTDSEVAEGLVEIREEYVEDDSEEDESESDSAIEDVPSSGNDTSKEVDYASFLSLMDELEKEEALAEENGNDSDPSEETTDDFDDSPYQRPADRIPPNQNEFPKRHNHQEDIADQLNFANLAVQSQVKEGKILSQNVSSIDPSVKPPIVPKEKISRATSASEIEVQHQTSQPSFDRRKAFTGSIVEHGENLKKGSREQSSSSQVSGSHPVKPVSRFKMQRK 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03305 356 Pfam Prefoldin subunit 30 142 IPR004127 -
Vivi5g03305 356 PANTHER RNA POLYMERASE II SUBUNIT 5-MEDIATING PROTEIN NNX3 239 356 - -
Vivi5g03305 356 MobiDBLite consensus disorder prediction 152 167 - -
Vivi5g03305 356 MobiDBLite consensus disorder prediction 152 180 - -
Vivi5g03305 356 Gene3D - 19 165 IPR009053 -
Vivi5g03305 356 MobiDBLite consensus disorder prediction 197 245 - -
Vivi5g03305 356 SUPERFAMILY Prefoldin 19 143 - -
Vivi5g03305 356 CDD Prefoldin_alpha 19 143 - -
Vivi5g03305 356 Coils Coil 184 204 - -
Vivi5g03305 356 Coils Coil 19 39 - -
Vivi5g03305 356 MobiDBLite consensus disorder prediction 197 217 - -
Vivi5g03305 356 MobiDBLite consensus disorder prediction 330 344 - -
Vivi5g03305 356 Coils Coil 106 126 - -
Vivi5g03305 356 MobiDBLite consensus disorder prediction 268 356 - -
Vivi5g03305 356 MobiDBLite consensus disorder prediction 294 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03305 Vivi-Chr5 123813418 123818396 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03305 K17560 - gmx:100781544 352.829