Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03271 ATGTCTATGTCTCTTTCTCTTGTTCGTCTCTCTTGTTCCTCTCATTCGATTCCTCCCCAATTACCGAATTCTCGTACTGCCCGTTTCAGTTTTTGCCGCTATAGACGCAGACACGTTTCTGCTTCATCTTCCATTCACCGTGGTCTCTTCAAAGTCCATTCCCTTTCCAGCCTCGGCAGAGCTCATGAATTTGACAGCATAAGTCAAAGGAGCCACGATGAAGAAGAAGATGACGAACAACAAATTAGGACTAGGGCTAGTAATGAACATCAAGTAGACGATGAAGAAGAAGATGAAGAAGAGGAATCTATCAGCTCTTGTGTTTTCCCTGAAAGATGGGATGTCTTAGGTCTTGGACAAGCCATGGTAGACTTTTCTGGCACAGTGGATGATGAGTTCTTGAAGAATTTAGGATTAGAAAAGGGAACAAGGAGACTTGTAAATCATGAGGAAAGAGGTAGAGTTTTGCAGGCCATGGATGGTTGCAGCTATAAAGCTGCCGCTGGTGGATCGCTTTCTAATACCTTAGTTGCCCTGGCAAGGCTTGGAGGTCGCTCCCTACGAGATCCTGTTATAAATGTGGCAATGGCTGGCAGTGTTGCGAGTGATCTGTTGGGTGGTTTCTACAGGGAAAAATTACGCCGAGCAAATGTGCAATTTCTGTCTGTGCCTATCAAGGATGCGACAACTGGAACAGTTATAGTACTTACAACTCCAGATGCTCAGCGAACAATGCTTGCATATCAGGGCACATCTTCAACCGTTAACTTTGACACTTCCTTGGCAAGTGCAGTTTCTAAGACCAACATACTTGTTGTTGAAGGTTATCTATTTGAACTTCCCGATACTATTAAAACAATAACAAAAGCATGTATGGAAGCTAGGAGTAATGGTGCTCTGGTTGCAGTAACAGCTTCAGATGTCTCCTGCATTGAGAGGCATTTTGATCATTTCTGGGAGATCATAGGCAATTATGCAGATTTAATCTTCGCAAACGTTGATGAGGCGAGAGCTCTTTGTAATTTTGATGCAAAGGAGAGCACTGTTTCTGTTACAAGGTATCTAAGTCAGTTTGTCCCTCTAGTATCCGTTACGGACGGTATCAGAGGCTCTTACATAGGTGTAAAAGGTGAAGCCGTATACATCCCTCCCTCTCCATGTGTTCCAGTGGATACCTGTGGTGCTGGTGATGCATATGCATCTGGCATTCTGTATGGTGTTTTACGAGGCATGTCAGATTTGAGGAGTATCGGTACAATAGCAGCTAAGGTTGCGTCCACTGTTGTTGCACAGCAGGGAACGAGGCTACGAATTTCAGATGCAGTTAAATTGGCTGAATCTTTTGCATTTCAACTTGATACATCGTCTGTTCGATCTGATGTTGGTACTGATCATATTTCCAGTGTTTAA 1410 0.4369 MSMSLSLVRLSCSSHSIPPQLPNSRTARFSFCRYRRRHVSASSSIHRGLFKVHSLSSLGRAHEFDSISQRSHDEEEDDEQQIRTRASNEHQVDDEEEDEEEESISSCVFPERWDVLGLGQAMVDFSGTVDDEFLKNLGLEKGTRRLVNHEERGRVLQAMDGCSYKAAAGGSLSNTLVALARLGGRSLRDPVINVAMAGSVASDLLGGFYREKLRRANVQFLSVPIKDATTGTVIVLTTPDAQRTMLAYQGTSSTVNFDTSLASAVSKTNILVVEGYLFELPDTIKTITKACMEARSNGALVAVTASDVSCIERHFDHFWEIIGNYADLIFANVDEARALCNFDAKESTVSVTRYLSQFVPLVSVTDGIRGSYIGVKGEAVYIPPSPCVPVDTCGAGDAYASGILYGVLRGMSDLRSIGTIAAKVASTVVAQQGTRLRISDAVKLAESFAFQLDTSSVRSDVGTDHISSV 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03271 469 MobiDBLite consensus disorder prediction 65 91 - -
Vivi5g03271 469 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 391 404 IPR002173 GO:0016301
Vivi5g03271 469 CDD adenosine_kinase 112 437 - -
Vivi5g03271 469 FunFam Putative sugar kinase slr0537 116 440 - -
Vivi5g03271 469 Gene3D - 122 248 - -
Vivi5g03271 469 SUPERFAMILY Ribokinase-like 113 436 IPR029056 -
Vivi5g03271 469 PANTHER SUGAR KINASE 110 445 - -
Vivi5g03271 469 MobiDBLite consensus disorder prediction 63 106 - -
Vivi5g03271 469 Gene3D - 116 433 IPR029056 -
Vivi5g03271 469 Pfam pfkB family carbohydrate kinase 164 436 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03271 Vivi-Chr5 123169769 123172947 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03271 - - lang:109355577 653.669
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03271 5 123169769 123172947 Vivi5g03271 5 123169769 123172947 ECH