Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03262 ATGTCTGGTCAACTAGAGCATGAGTTGGAGCTTCATGTGCCAGCAAGTGAAGCATGGGAACTCTTTGGCACACTTGGTATTGGAAAACTTGTTGTTGAAGAGATGCCTGAATTGTTTCAGAAAGTGGAATTACTGGAAGGAGATGGAGGAGTTGGAACTGTTCTCAAACTCACATTCACCCCAGGTATACCTGGTCCAGCTAGTTACAGTGAGAAGTTCACCAAGATTGATAATGAAAAGCGTATCAAAGAAGTAGAGGTAGTTGAAGGTGGATACTTGGAATTTGGATTCACACTATATAGAGTTCGTTTTGAAGTTATAGAAAAAGGTGAAGATTCGAGTATAATCAAATCTACAATAGAGTATGAAGTTAAGGAAGCAGCTAATGCTTCACTTGTTTCTATTGAGCCATTGGCAAACATTGCACAAGTTGCTAAGAATTATCTCGGAAGAAACAAGGCTGCAAAAGAAACAAAGTAG 480 0.3937 MSGQLEHELELHVPASEAWELFGTLGIGKLVVEEMPELFQKVELLEGDGGVGTVLKLTFTPGIPGPASYSEKFTKIDNEKRIKEVEVVEGGYLEFGFTLYRVRFEVIEKGEDSSIIKSTIEYEVKEAANASLVSIEPLANIAQVAKNYLGRNKAAKETK 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03262 159 FunFam S-norcoclaurine synthase 1 154 - -
Vivi5g03262 159 Pfam Pathogenesis-related protein Bet v 1 family 1 127 IPR000916 GO:0006952
Vivi5g03262 159 SUPERFAMILY Bet v1-like 3 146 - -
Vivi5g03262 159 PANTHER - 5 128 - -
Vivi5g03262 159 Gene3D - 1 154 IPR023393 -
Vivi5g03262 159 CDD Bet_v1-like 3 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03262 Vivi-Chr5 122985738 122986494 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03262 - - gmx:100305838 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03262 5 122985738 122986494 Vivi5g03262 5 122985738 122986494 ECH