Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03222 ATGCTTGGCTCCACGTGCTTTTGTTGGAATTCAATTTCATTTGATCAATCGTTTCCAAATCACCCTCAAATCTTTTCTCTTCCTTCACCCCTCCCTCAATGGCCTCAAGCAGGACAAGGTTTTGCATCAGGAGTTGTGAATCTTGGTGAAATTGAAGTTTTCAAGGTTACACGGTTTGATTTCATTTGGAGCAGTGCTATTCTAGACTTTAAAAAAGCTGTTATATTCTACAAGCCTGTGGGAATACCTAACAGTTTCCATGTCCTTGGTCACTATTGTCAAACCAGTGACAAGCCTTTAAGGGGTTTTGTACTTGTTGCGAAGGAAGCACGAACTTGCATGACCGAAACTAATGAGGAAAAGTTACCTCCTCTGAGGAATCCTGTTGATTTTAAGTTGGTTTGGAGTTCGAATGAGCCCGGCAGTCTTGAAATTTCAAGTGGATGTGGTTATTTTTGGCTACCCGAACCTCCCGAAGGTTACAAGGCTGTTGGATACTTTGTTTCAAACAAACCGAACAAGCCTGAGTTGGATGAAATGTGTTGTGTTCGTGCTGATCTAACTGATAAATGTGAACCTTATCGTGTAACATTTGCTGTTAGTTCTAGAACTCCGGAGTTTTCGTTTCAGGTATGGAGCTCAAGACCTTGTGACCGTGGCATGCTAGGGAAAGGTGTTTCTGTTGGGACTTTTCTCTGCAATAGTGGTTTGAGTAATGGAGAAGAGCACCCTGTTGCATGCTTGAAGAACCTGAATCCTGCTCTGCCATCAATGCCTAATTTGCAACAAATTCACGCACTTACTGAACATTATGGCCCTACTCTTTTCTTTCATCCTGAGGAAATTTACTTGCCTTCTTCTGTTGATTGGTTTTTCAACACCGGAGCCCTTTTATACCAAAAGGGTGAGTCTGCGGGAGAGGGAATCGATGCAGCCGGCTCAAATTTACCATGTGGAGGATCAAATGATGGCCAATTTTGGATAGATTTGCCAAATGATGGTCGGAGGGATCTCGTCAAACGCGGGGACTTAAAAAGTGCAAAGCTTTATATTCATGTAAAACCAGCTCTTGGTGGGACTTTTACCGACATTGCAATGTGGATATTTTGCCCCTTCAATGGGCCAGCCACTTTGAAAATTGGACTCAAGAGTATACCTTTGAGCAAGATTGGAGAGCATGTTGGGGATTGGGAACATTTCACGCTTCGTATATGCAACTTCGCCGGAGAGCTCTATAGTATATACTTCTCGCAGCATAGTGGCGGTGAATGGGTGGACACGTGTGACTTGGATTATATTGATGGCAATAAAGCTATTGTTTACTCGTCAAAAAGTGGACATGCAAGTTACCCTCGTCCTGGAACATATATCCAAGGATCTTCAAAACTAGGTCTTGGCATTAGGAACGATGCTGTTCGTAGTAATTTTTACGTGGATTCGAGTATCCATTATGAGATTTTTGCAGCTGAATATCTTGGAAATGTTGTCCCTGAGCCTAATTGGTTGCAGTTTATGAGACAGTGGGGTCCCAAAATTGTTTATGATTCAAAAACTGAATTGGATAAGATTATCAACGCGCTTCCTCACGTGCTTCGGTCTTCAATGAGAAACTTGTTTAACAAGCTTCCGTTGGAGCTGTATGGCGAGGAAGGTCCTACTGGGCCTAAAGAGAAAAATAACTGGATACAAGATGAGAGATGGTGA 1704 0.4261 MLGSTCFCWNSISFDQSFPNHPQIFSLPSPLPQWPQAGQGFASGVVNLGEIEVFKVTRFDFIWSSAILDFKKAVIFYKPVGIPNSFHVLGHYCQTSDKPLRGFVLVAKEARTCMTETNEEKLPPLRNPVDFKLVWSSNEPGSLEISSGCGYFWLPEPPEGYKAVGYFVSNKPNKPELDEMCCVRADLTDKCEPYRVTFAVSSRTPEFSFQVWSSRPCDRGMLGKGVSVGTFLCNSGLSNGEEHPVACLKNLNPALPSMPNLQQIHALTEHYGPTLFFHPEEIYLPSSVDWFFNTGALLYQKGESAGEGIDAAGSNLPCGGSNDGQFWIDLPNDGRRDLVKRGDLKSAKLYIHVKPALGGTFTDIAMWIFCPFNGPATLKIGLKSIPLSKIGEHVGDWEHFTLRICNFAGELYSIYFSQHSGGEWVDTCDLDYIDGNKAIVYSSKSGHASYPRPGTYIQGSSKLGLGIRNDAVRSNFYVDSSIHYEIFAAEYLGNVVPEPNWLQFMRQWGPKIVYDSKTELDKIINALPHVLRSSMRNLFNKLPLELYGEEGPTGPKEKNNWIQDERW 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03222 567 Pfam Vacuolar protein sorting-associated protein 62 22 565 IPR009291 -
Vivi5g03222 567 PANTHER BNAC01G40110D PROTEIN 1 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03222 Vivi-Chr5 122180449 122183212 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03222 - - gmx:100793026 864.759