Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03220 ATGGAGACGCAACCACACGATAATTTGCAGCACGCACCGGTTTCTTCCAGTGACGCCGATATTCTACCCAACGATGCGGTGGCTGATTTTTCAAATCACAGAGAAACTGAAGAAAAAAGCCATGTTTCAAGGGATGAAGTTATTCGGGTTCTACAAGCTATTGCATCCTCCGGGAGGTTCTGGCATGACTGGGATAATCTCAAGAGTATGCTATCATTTCAGCTGAAGCAGGTATTGTCTGAGTACCCTGAGGCAAAAATGACAAGTGAGCAGCAATATGCTTCACTAAGAGAATCCTACGCTGATTTGGTCCACAAATTGGATGATGCACTTACATGTTTTATTGATGGCCCACCATTTACGTTGCAAAGGGTTTGTGAGATTCTATTGGACGCAAAAAACATTTATCCAAATCTTTCCAAGCTGGCTTTAGCTCTTGAAAAGAATTTGTTAGTTACATCTACATTGACAATCTGCACTGATCCATATCCTCAAGAATCAGTACAAGAGACTAATGCCATAGAGAAGCCAAGTGAAAAGCAGCAGGAGCAGCAATCTGATGACGCGCAAAATGGTATTGAGCCTTTGGTAACAGACAATGACGAAGTAATGGTTGACGCTGATGCAGGTGATGATGTGACCATTGAAATGGAAACTTTTGAAGATGCTAAATCATCAGAAAATGATCCTGAGCCAAATGTTAATAATGCACAAGTCTCGTGA 723 0.4177 METQPHDNLQHAPVSSSDADILPNDAVADFSNHRETEEKSHVSRDEVIRVLQAIASSGRFWHDWDNLKSMLSFQLKQVLSEYPEAKMTSEQQYASLRESYADLVHKLDDALTCFIDGPPFTLQRVCEILLDAKNIYPNLSKLALALEKNLLVTSTLTICTDPYPQESVQETNAIEKPSEKQQEQQSDDAQNGIEPLVTDNDEVMVDADAGDDVTIEMETFEDAKSSENDPEPNVNNAQVS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03220 240 PANTHER PPP4R2-RELATED PROTEIN 1 228 IPR015267 GO:0019888|GO:0030289
Vivi5g03220 240 MobiDBLite consensus disorder prediction 1 17 - -
Vivi5g03220 240 MobiDBLite consensus disorder prediction 171 240 - -
Vivi5g03220 240 MobiDBLite consensus disorder prediction 1 22 - -
Vivi5g03220 240 Pfam PPP4R2 43 233 IPR015267 GO:0019888|GO:0030289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03220 Vivi-Chr5 122171756 122176098 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03220 K15425 - gmx:100803269 320.857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03220 5 122171756 122176098 Vivi5g03220 5 122171756 122176098 ECH