Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03215 ATGAACTGCAGCGTCGGATCCATCGTATGGGTTCGCCGGCGAAACGGGTCGTGGTGGCCGGGTCAGATACTCGGCACCGATGATCTCTCCACTTCTCATCTCACTTCTCCTCGTTCAGGAACTCCGGTTAAGCTTCTCGGCAGAGAAGATGCTAGCGTAGATTGGTACAATTTGGAGAAATCCAAACGTGTCAAGTCATTCCGATGCGGCGAGTTTGATGATTGTATTGAAAAAGTTGAATCCTCTCATGAGATGCCGTTGAAAAAACGAGAAAAATATGCCCGCCGTGAAGATGCCATTCTTCATGCTCTTGAACTCGAGAGGCAGTTGGTGAAAAAGCAGGCAAAAGTTGCCATTGCTTCTGATCGAACCAATTGTAGATCGTCTAGTTCCCTTAAAAAGGGTTTGGCAGCGTTCGGGGAAATCAATGATGCTGAAAAACATTTAAATTTGAAATCACATGTGTCTTGTGAAAATGAAGTTGCTGGAGATTGTTTTCCTTTGGAGGTAGCCAGGGATATGGAAGTAGATCTCTGCGATGTGACTCCTCGGACGAGAGGCTTGCAGGGTTTTGGAATCAAAATTCCACCCTTGAAAGAGAACCTCCCATCCCCCGTGGATCGACGTGTTTCTCAGAATCTTTCAGTTGATGAGGGTGCTCAGGCTCTTGTAAATGATAGTATTATTACGCGGAGTGCACTCCAGACAAATGGGGCTAGGCAAATATCAACCCGGGAAAAGAAGAGCAGGTATTTTTATTTTCCGTCCGAGTCTAGTGATTCTCTTGAATACAAAGAGAGACTAGACCTTGCTGAGATGTCATCTCCAAAACTTGGAGGGGAGTTTCCTTATCGCGGTTCTTTGGTTGGAGAGACTGAGTCAACTTTTATGGATGTTGAATCTGGCTCTTCAGAAACAGACTCTACTGTTTCTGATTCAGATTCTTCTGAGACAGAACCTGACATGGAAGCAAAGGTGATACTTACAGAAACTGGCCGGGATTTTGAAGAACATGAGAGCACTAGCAGTGAGGAGCTTGATGAATTAGCAGTGACCGGCGACATGCCTCACCTCTATCCTCATGAACTGACATCTTGTCATGAAGCCATGTCTAAATGGCAACTAAAAGGGAAAAGGAATAGTCGGAATCTTGTAAAGAGGTCTTATGGTCCCCCTGACGGAAAAAGTGTTATATGTGAAGCAGAAGTGGATTTTGAAGATGGAAGACCTAATTTAAGTCACAAGAGAATGGGTTCAAGTTTGCATTGTTACAGAAATGATTTCAGCGATGATGCACTATATGACGATGATCAAATGTTGGGATCGGAAGATGAATACTCTCCCACTCCAAGAGCTGTATCAAAAGTTCAAAATAGAACTCATCGTGGTGCTAAGTGGAATGACTTGGCCTCGGATGAACATCTTGCTTCAAAAGAATATTGGGATATGAATGGTTCTACTCCAACGCATAGCAATGGTTATCATGTCAGTGGGAGGACGAGGTCGGTGCTGATTAACGTAGACGTGAAGGTTCAAGCAGGATATCGGAAGGAGCCTGTACCCATTATTTCTCTCATGAGTAAATTAGACGGGAAGGCAATAATAGGGCACCCAATTCAGGTTGAGGTCCTTAAGGATGGTTCTTCTGATGCCCTTTTTTCTGCAATTGATGACTTCAGTAATGACGGGATTGGTCTTGAGGAAAGCAGTGTGCTTCGACAAGGATGGAGCACTGCAAGGAGAACAGCAAATTTTCGTGTTCCTCGCACACATGTATTTTCATCAAATGGTGCTGAAGTTGCTGGCGAGTTTCCCTCCTTAGATCAACAACAAAGCTTTGATTATAAAAAACAAAACTCTGGAAGTTCCAGTCATAAAGCAAGCCTCCAAAAGAAGAGTGGCAACAAAAAGTTCTATAAAAAGGCGCCAAAGAAGTCGAGCTTGTCATCTAACCAGAAAATTAGAACTCTGTCCTCGTTATCTATTGAACATAGACTTAGAAATCCATTGCATGATATAAGTAGTTATCAAACAGATAGATTAATTAAACCAGAAATCTCTGGACCCACCACAGTTGCTTGCATACCAGTCCAGTTAGTATTTAGTAGATTACTTGAGAAGATTAATAGGCCACCATTGAAAGCAGCATTGCCGAATACTGGTGTGGAGAGAAATTCATAG 2181 0.4319 MNCSVGSIVWVRRRNGSWWPGQILGTDDLSTSHLTSPRSGTPVKLLGREDASVDWYNLEKSKRVKSFRCGEFDDCIEKVESSHEMPLKKREKYARREDAILHALELERQLVKKQAKVAIASDRTNCRSSSSLKKGLAAFGEINDAEKHLNLKSHVSCENEVAGDCFPLEVARDMEVDLCDVTPRTRGLQGFGIKIPPLKENLPSPVDRRVSQNLSVDEGAQALVNDSIITRSALQTNGARQISTREKKSRYFYFPSESSDSLEYKERLDLAEMSSPKLGGEFPYRGSLVGETESTFMDVESGSSETDSTVSDSDSSETEPDMEAKVILTETGRDFEEHESTSSEELDELAVTGDMPHLYPHELTSCHEAMSKWQLKGKRNSRNLVKRSYGPPDGKSVICEAEVDFEDGRPNLSHKRMGSSLHCYRNDFSDDALYDDDQMLGSEDEYSPTPRAVSKVQNRTHRGAKWNDLASDEHLASKEYWDMNGSTPTHSNGYHVSGRTRSVLINVDVKVQAGYRKEPVPIISLMSKLDGKAIIGHPIQVEVLKDGSSDALFSAIDDFSNDGIGLEESSVLRQGWSTARRTANFRVPRTHVFSSNGAEVAGEFPSLDQQQSFDYKKQNSGSSSHKASLQKKSGNKKFYKKAPKKSSLSSNQKIRTLSSLSIEHRLRNPLHDISSYQTDRLIKPEISGPTTVACIPVQLVFSRLLEKINRPPLKAALPNTGVERNS 726
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03215 726 MobiDBLite consensus disorder prediction 611 629 - -
Vivi5g03215 726 Coils Coil 103 123 - -
Vivi5g03215 726 Gene3D - 1 119 - -
Vivi5g03215 726 MobiDBLite consensus disorder prediction 295 324 - -
Vivi5g03215 726 MobiDBLite consensus disorder prediction 611 651 - -
Vivi5g03215 726 CDD PWWP 6 106 - -
Vivi5g03215 726 MobiDBLite consensus disorder prediction 295 311 - -
Vivi5g03215 726 ProSiteProfiles PWWP domain profile. 5 67 IPR000313 -
Vivi5g03215 726 SUPERFAMILY Tudor/PWWP/MBT 4 109 - -
Vivi5g03215 726 PANTHER T17B22.17 PROTEIN-RELATED 2 716 IPR044679 -
Vivi5g03215 726 Pfam PWWP domain 6 90 IPR000313 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03215 Vivi-Chr5 122101060 122104547 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03215 - - aprc:113864977 944.11
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g03215 5 122101060 122104547 Vivi5g03215 5 122101060 122104547 ECH