Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g03209 ATGGAGGAAGCATCTAAAACTATTGCACACCAAATCGGAGGTATCCAAAACGACGTTCTCCGGTTCGGACTCCCCGGAGTCAAAAGCGACATCGTCGGCTCTCACCCTCTCGAATCATCTCTCCAATCTGTGAGGGGAGTGGAAGAAGCCATGACGAGGCAATGCAAAGTGAACCTGTATGGAGCTGCTTTTCCACTGAAGGAGGAACTTGATAGGCAAATACTTTCTCGGTTCCAGAGGCCTCCTGGGGTAATTCCTTCTTCAATGCTGGGTTTGGAGACTGTTACAGGAAGTCTTGATCACTTTGGTTTCGAGGATTTTCTAAATGACCCTCGCGAATCAGAGACTTTCCGGCCATTGGATATGCATCATGGAATGGAAGTTCGCCTTGGGATATCTAAAGGACCTGTCTACCCAAGTTTAATATAA 429 0.4732 MEEASKTIAHQIGGIQNDVLRFGLPGVKSDIVGSHPLESSLQSVRGVEEAMTRQCKVNLYGAAFPLKEELDRQILSRFQRPPGVIPSSMLGLETVTGSLDHFGFEDFLNDPRESETFRPLDMHHGMEVRLGISKGPVYPSLI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g03209 142 Pfam Proteasome maturation factor UMP1 16 130 IPR008012 GO:0043248
Vivi5g03209 142 PANTHER PROTEASOME MATURATION PROTEIN UMP1 4 142 IPR008012 GO:0043248
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g03209 Vivi-Chr5 122042243 122046996 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g03209 K11599 - gmx:100789182 251.521